RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 K7EIM0 57 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 Q6AWC8 147 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 CFHR4Q92496 578 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ZNF625Q96I27 306 aaPredicted RBP3.75□□□□□ -1.81
UBR1-201ENST00000290650 FAM167A-AS1Q96KT0 104 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 SPXQ9BT56 116 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ATMQ13315 3056 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 KIR2DL5BA0A0G2JN68 375 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 KIR2DL5BA0A0G2JPC4 375 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ATP5LO75964 103 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 IGKV1-17P01599 117 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ANXA2RQ3ZCQ2 193 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 KIR2DL5AQ8N109 375 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ZNF503Q96F45 646 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 PRR25Q96S07 402 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ANKRD17O75179 2603 aaKnown RBP3.75□□□□□ -1.81
UBR1-201ENST00000290650 IGLC2P0DOY2 106 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 IGLC3P0DOY3 106 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 CD28P10747 220 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 SIGLEC8Q9NYZ4 499 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 DKK2Q9UBU2 259 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 IGHV7-81A0A0B4J1V7 117 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 DEFB112Q30KQ8 113 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ZC2HC1BQ5TFG8 222 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 LINC00322Q6ZN03 302 aaPredicted RBP3.75□□□□□ -1.81
UBR1-201ENST00000290650 CENPVL3A0A0U1RRI6 287 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 K7ERJ3 54 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 OR2K2Q8NGT1 345 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 DMXL1Q9Y485 3027 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 THAP8Q8NA92 274 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 A0A096LPF7 62 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 I3L2K1 104 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 TEX43Q6ZNM6 134 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 OR5A1Q8NGJ0 315 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 SPAG8Q99932 426 aaPredicted RBP3.74□□□□□ -1.81
UBR1-201ENST00000290650 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 ACANP16112 2415 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 A0A1B0GWB2 263 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 C10orf142B7Z368 130 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 TEX22C9J3V5 150 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 FNDC10F2Z333 226 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 LINC00311Q8N616 119 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 LINC01356Q8N9X3 169 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 MTORP42345 2549 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 POU2AF1Q16633 256 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 ZFAND6Q6FIF0 208 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 APRG1Q8IVJ8 170 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 TTC9CQ8N5M4 171 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 DAZ1Q9NQZ3 744 aaKnown RBP3.74□□□□□ -1.81
UBR1-201ENST00000290650 ADARB2-AS1A8MUL3 147 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 FAM110DQ8TAY7 271 aaPredicted RBP3.74□□□□□ -1.81
UBR1-201ENST00000290650 TTTY13Q9BZ97 58 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 NXT2Q9NPJ8 142 aaKnown RBP3.74□□□□□ -1.81
UBR1-201ENST00000290650 RNF114Q9Y508 228 aa3.74□□□□□ -1.81
UBR1-201ENST00000290650 Q0VG73 95 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 DTX2Q86UW9 622 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 RPL39LQ96EH5 51 aaKnown RBP3.73□□□□□ -1.81
UBR1-201ENST00000290650 MS4A6AQ9H2W1 248 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 KAAG1Q9UBP8 84 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 DOPEY1Q5JWR5 2465 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 COL4A2P08572 1712 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TMEM238LA0A1B0GVL6 79 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 A6NJY4 79 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 DEFB130BP0DP73 79 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 DEFB130AP0DP74 79 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 GP9P14770 177 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 PAX1P15863 534 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 SLURP1P55000 103 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 LY96Q9Y6Y9 160 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 LRBAP50851 2863 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 LTAP01374 205 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TCTEX1D4Q5JR98 221 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 FAM104BQ5XKR9 115 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 ORAOV1Q8WV07 137 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 ATP6V0BQ99437 205 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 RNF5Q99942 180 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 DMXL2Q8TDJ6 3036 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TRGV4A0A0C4DH28 118 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 OVOL1O14753 267 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 SRSF2Q01130 221 aaKnown RBP3.73□□□□□ -1.81
UBR1-201ENST00000290650 IGKV1D-37A0A075B6S9 117 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TRAV13-1A0A0B4J241 112 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 ZNF415Q09FC8 603 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 KIR3DS1Q14943 382 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 CR1LQ2VPA4 569 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 IGF2BP2-AS1Q96M15 143 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 PEMTQ9UBM1 199 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TP53TG3Q9ULZ0 132 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 AKAP13Q12802 2813 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 ESDP10768 282 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 UNQ9165/PRO28630Q6UXU0 137 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 Q8N9W7 124 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
UBR1-201ENST00000290650 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
UBR1-201ENST00000290650 CTSGP08311 255 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 SAMD5Q5TGI4 173 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 PCP2Q8IVA1 136 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms