RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.43
USP43-201ENST00000285199 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 AGPAT4-IT1Q9H0P7 198 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 IGLL5B9A064 214 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 F8W1H4 67 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 CIRBPQ14011 172 aaKnown RBP12.33□□□□□ -0.44
USP43-201ENST00000285199 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
USP43-201ENST00000285199 K7EIM0 57 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
USP43-201ENST00000285199 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
USP43-201ENST00000285199 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 C19orf71A6NCJ1 209 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 F8VRH5 84 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 BOD1L2Q8IYS8 172 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 RPL39LQ96EH5 51 aaKnown RBP12.32□□□□□ -0.44
USP43-201ENST00000285199 C7orf69Q9H7B7 122 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 KLF12Q9Y4X4 402 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 ATG2AQ2TAZ0 1938 aa12.32□□□□□ -0.44
USP43-201ENST00000285199 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
USP43-201ENST00000285199 ATP5J2P56134 94 aa12.31□□□□□ -0.44
USP43-201ENST00000285199 Q6ZS92 163 aa12.31□□□□□ -0.44
USP43-201ENST00000285199 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
USP43-201ENST00000285199 TRAV41A0A0B4J266 112 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 OVOL3O00110 214 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 GRNP28799 593 aaKnown RBP12.3□□□□□ -0.44
USP43-201ENST00000285199 SAA4P35542 130 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 SEM1Q6ZVN7 128 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 TRAV12-2A0A075B6T6 113 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 NPFFO15130 113 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 GNRH2O43555 120 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 TCF15Q12870 199 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
USP43-201ENST00000285199 DSCAMO60469 2012 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 THBDP07204 575 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 G3V4G9 280 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 I3L2K1 104 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
USP43-201ENST00000285199 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
USP43-201ENST00000285199 B5MCH6 92 aa12.29□□□□□ -0.44
USP43-201ENST00000285199 TMEM262E9PQX1 116 aa12.29□□□□□ -0.44
USP43-201ENST00000285199 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
USP43-201ENST00000285199 C20orf78Q9BR46 151 aa12.29□□□□□ -0.44
USP43-201ENST00000285199 DNAL4O96015 105 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 FGF6P10767 208 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 MLST8Q9BVC4 326 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 CGB3P0DN86 165 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 CGB7P0DN87 165 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 RRN3P1Q2M238 152 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 SS18L2Q9UHA2 77 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 C3orf56Q8N813 242 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
USP43-201ENST00000285199 PIEZO1Q92508 2521 aa12.27□□□□□ -0.44
USP43-201ENST00000285199 LINC00311Q8N616 119 aa12.27□□□□□ -0.44
USP43-201ENST00000285199 MUC22E2RYF6 1773 aaPredicted RBP12.27□□□□□ -0.45
USP43-201ENST00000285199 NCOR1P1Q9H4R4 102 aa12.27□□□□□ -0.45
USP43-201ENST00000285199 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.45
USP43-201ENST00000285199 AGRNO00468 2067 aa12.27□□□□□ -0.45
USP43-201ENST00000285199 M0R2P5 195 aa12.27□□□□□ -0.45
USP43-201ENST00000285199 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 VCYO14598 125 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 RNF5Q99942 180 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 PTPRSQ13332 1948 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 LTBP2Q14767 1821 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 A0A087WX48 190 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 SP5Q6BEB4 398 aaPredicted RBP12.26□□□□□ -0.45
USP43-201ENST00000285199 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 LINC01587Q99440 93 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 H3BUX3 64 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 SIVA1O15304 175 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 RS1O15537 224 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 ODF1Q14990 250 aa12.26□□□□□ -0.45
USP43-201ENST00000285199 POLQO75417 2590 aa12.25□□□□□ -0.45
USP43-201ENST00000285199 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
USP43-201ENST00000285199 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
USP43-201ENST00000285199 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
USP43-201ENST00000285199 UBE2L6O14933 153 aa12.25□□□□□ -0.45
USP43-201ENST00000285199 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
USP43-201ENST00000285199 TEX22C9J3V5 150 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 IGHV3-53P01767 116 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 CRIP1P50238 77 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 TRANK1O15050 2925 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 OVOL1O14753 267 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 C9orf139Q6ZV77 190 aa12.24□□□□□ -0.45
USP43-201ENST00000285199 SPAG8Q99932 426 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms