RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RS1O15537 224 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 HIVEP3Q5T1R4 2406 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1-12A0A0C4DH73 117 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 IGLL5B9A064 214 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1D-12P01611 117 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 FAM231DQ6ZW35 169 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 GGNQ86UU5 652 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
NIPBL-201ENST00000282516 KIF26AQ9ULI4 1882 aaPredicted RBP7.01□□□□□ -1.29
NIPBL-201ENST00000282516 B5MCH6 92 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 H0YGX0 51 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
NIPBL-201ENST00000282516 TET2Q6N021 2002 aaPredicted RBP7□□□□□ -1.29
NIPBL-201ENST00000282516 NREPQ16612 68 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 Q9H8V8 135 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 UBE2E1P51965 193 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 GFI1Q99684 422 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 A0A087WV48 116 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV3-38A0A0C4DH36 116 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 NPYP01303 97 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 ATP6V0E1O15342 81 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1-39P01597 117 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1D-39P04432 117 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 Q6P435 159 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 MESP1Q9BRJ9 268 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IL15RAQ13261 267 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 RNF152Q8N8N0 203 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1OR2-108A0A075B7D4 117 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 PRB2P02812 416 aaPredicted RBP7□□□□□ -1.29
NIPBL-201ENST00000282516 COX7B2Q8TF08 81 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 F8P00451 2351 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV4-28A0A0C4DH34 117 aa7□□□□□ -1.29
NIPBL-201ENST00000282516 MSMBP08118 114 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 CFC1P0CG37 223 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 Q6ZWC4 215 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1-16P04430 117 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 MRPL53Q96EL3 112 aaKnown RBP6.99□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV4-4A0A075B6R2 117 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1D-17A0A075B6S4 117 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 TNS1Q9HBL0 1735 aaKnown RBP6.99□□□□□ -1.29
NIPBL-201ENST00000282516 LRRK2Q5S007 2527 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 TRAV4A0A0B4J268 109 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 C5orf63A6NC05 138 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 DEFB125Q8N687 156 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 DYNAPQ8N1N2 210 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
NIPBL-201ENST00000282516 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 FOXI2Q6ZQN5 318 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 EFNA2O43921 213 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 J3QLI3 93 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 UBE2AP49459 152 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 NDUFA4L2Q9NRX3 87 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 C9JQL5 133 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 A0A0G2JNJ9 132 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 C9orf47Q6ZRZ4 202 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 PRR25Q96S07 402 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 Q9UFV3 132 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV7-4-1A0A0J9YVY3 117 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 MBD3L4A6NDZ8 208 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 MBD3L3A6NE82 208 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 MBD3L5A6NJ08 208 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 CSRP3P50461 194 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 MBD3L2Q8NHZ7 208 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 A0A1B0GUS0 222 aa6.98□□□□□ -1.29
NIPBL-201ENST00000282516 KLF2Q9Y5W3 355 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-201ENST00000282516 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 H3BRN7 92 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV1-69DA0A0B4J2H0 117 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV1-69P01742 117 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 NPSP0C0P6 89 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 PDE6GP18545 87 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 IGHV2-70DA0A0C4DH43 119 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 PINLYPA6NC86 204 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 BUB3O43684 328 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 LTAP01374 205 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 ZC2HC1AQ96GY0 325 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 NDUFS7O75251 213 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 Q6ZVH6 145 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 BPESC1Q9GZL8 116 aa6.97□□□□□ -1.29
NIPBL-201ENST00000282516 ETV2O00321 342 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-201ENST00000282516 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
NIPBL-201ENST00000282516 THSD7AQ9UPZ6 1657 aa6.96□□□□□ -1.29
NIPBL-201ENST00000282516 LYPD3O95274 346 aa6.96□□□□□ -1.29
NIPBL-201ENST00000282516 Q8TCH9 128 aa6.96□□□□□ -1.29
NIPBL-201ENST00000282516 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.29
NIPBL-201ENST00000282516 PRR15LQ9BU68 103 aa6.96□□□□□ -1.29
NIPBL-201ENST00000282516 ZNF833PQ6ZTB9 187 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 ZNF462Q96JM2 2506 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 NUP210Q8TEM1 1887 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-201ENST00000282516 COX7A2LO14548 114 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms