RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 C1orf43Q9BWL3 253 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 SPANXDQ9BXN6 97 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 DOCK10Q96BY6 2186 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 ATP5G1P05496 136 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 MALP21145 153 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 DLX6P56179 175 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 CACNA1HO95180 2353 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 H7C423 109 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
PDGFC-201ENST00000274071 HERVK_113P61574 105 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 GGNQ86UU5 652 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 METTL26Q96S19 204 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 PYGO1Q9Y3Y4 419 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 ASPMQ8IZT6 3477 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 SH2D1AO60880 128 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 DEFB121Q5J5C9 76 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 SLC25A29Q8N8R3 303 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 C17orf77Q96MU5 243 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 NAV3Q8IVL0 2385 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 EP300Q09472 2414 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-201ENST00000274071 A0A1W2PNU3 283 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-201ENST00000274071 TMEM258P61165 79 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 LINC00336Q6ZUF6 198 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 NEXN-AS1Q8NBZ9 246 aa7.11□□□□□ -1.27
PDGFC-201ENST00000274071 TMEM263Q8WUH6 116 aaKnown RBP7.11□□□□□ -1.27
PDGFC-201ENST00000274071 MRPL33O75394 65 aaKnown RBP7.1□□□□□ -1.27
PDGFC-201ENST00000274071 EGR2P11161 476 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-201ENST00000274071 CNTFRP26992 372 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 BEX4Q9NWD9 120 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-201ENST00000274071 ARFGEF3Q5TH69 2177 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 SAA1P0DJI8 122 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-201ENST00000274071 B3GALT5-AS1P59052 145 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
PDGFC-201ENST00000274071 A0A0G2JNJ9 132 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 RFPL3SP0C7P2 107 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 RNF152Q8N8N0 203 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 Q9UFV3 132 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 ZGRF1Q86YA3 2104 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 K7ENP7 123 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 M0R3E3 92 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 KLF14Q8TD94 323 aaPredicted RBP7.09□□□□□ -1.27
PDGFC-201ENST00000274071 KLK15Q9H2R5 256 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 SSUH2Q9Y2M2 353 aa7.09□□□□□ -1.27
PDGFC-201ENST00000274071 C17orf100A8MU93 164 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 CD177Q8N6Q3 437 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 CUL9Q8IWT3 2517 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 SUB1P53999 127 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDGFC-201ENST00000274071 Q1RN00 199 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 SPINK14Q6IE38 97 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 C14orf178Q8N769 122 aaPredicted RBP7.08□□□□□ -1.28
PDGFC-201ENST00000274071 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 ABCA1O95477 2261 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 CFAP47Q6ZTR5 3102 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 C5orf38Q86SI9 138 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 EEF1AKMT3Q96AZ1 226 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 TMEM14CQ9P0S9 112 aa7.08□□□□□ -1.28
PDGFC-201ENST00000274071 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 CGB1A6NKQ9 187 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 H3BT86 120 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 PLXNB1O43157 2135 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 TRIAP1O43715 76 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 CNFNQ9BYD5 112 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 PRRC2CQ9Y520 2896 aaKnown RBP7.07□□□□□ -1.28
PDGFC-201ENST00000274071 TRAV13-1A0A0B4J241 112 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 PINLYPA6NC86 204 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 RS1O15537 224 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 NSUN5P1Q3KNT7 163 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 C10orf55Q5SWW7 151 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 NRACQ8N912 160 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 TMEM190Q8WZ59 177 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 MED13Q9UHV7 2174 aa7.07□□□□□ -1.28
PDGFC-201ENST00000274071 ZFHX4Q86UP3 3567 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 TRAV26-2A0A0B4J265 109 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 A0A0B4J2C4 111 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 ENSAO43768 121 aaKnown RBP7.06□□□□□ -1.28
PDGFC-201ENST00000274071 DMXL1Q9Y485 3027 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 IGHV3-21A0A0B4J1V1 117 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 TRBV30A0A0K0K1B3 111 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 ACYP1P07311 99 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-201ENST00000274071 DPH3P1Q9H4G8 78 aa7.06□□□□□ -1.28
PDGFC-201ENST00000274071 SPRY2O43597 315 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 LYZP61626 148 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 TMEM86BQ8N661 226 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 C8orf31Q8N9H6 132 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 PFN2P35080 140 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
PDGFC-201ENST00000274071 C10orf105Q8TEF2 133 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 PLCE1Q9P212 2302 aa7.05□□□□□ -1.28
PDGFC-201ENST00000274071 ATOX1O00244 68 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms