RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 LINC01356Q8N9X3 169 aa11.65□□□□□ -0.54
PDPK1-201ENST00000268673 TRBV7-9A0A0J9YWB2 115 aa11.65□□□□□ -0.55
PDPK1-201ENST00000268673 SPRNQ5BIV9 151 aa11.65□□□□□ -0.55
PDPK1-201ENST00000268673 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.55
PDPK1-201ENST00000268673 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.55
PDPK1-201ENST00000268673 I3L2K1 104 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 UBE2E1P51965 193 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
PDPK1-201ENST00000268673 MRPL36Q9P0J6 103 aaKnown RBP11.64□□□□□ -0.55
PDPK1-201ENST00000268673 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 MSMBP08118 114 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 FGF6P10767 208 aa11.64□□□□□ -0.55
PDPK1-201ENST00000268673 CRYGCP07315 174 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 IFITM1P13164 125 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
PDPK1-201ENST00000268673 C8orf86Q6ZUL3 223 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 C1orf122Q6ZSJ8 110 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 DPH3Q96FX2 82 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 TTTY13Q9BZ97 58 aa11.63□□□□□ -0.55
PDPK1-201ENST00000268673 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 E7EUB6 86 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 GATA1P15976 413 aaPredicted RBP11.62□□□□□ -0.55
PDPK1-201ENST00000268673 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 RBAKDNA6NC62 111 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE5Q13069 117 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE6Q13070 117 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 ODF1Q14990 250 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 Q8N7P7 452 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 Q8N976 141 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 CCDC168Q8NDH2 2452 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 A0A087WWL8 130 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 CGB3P0DN86 165 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 CGB7P0DN87 165 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 K7EIM0 57 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 MAPK1IP1LQ8NDC0 245 aa11.62□□□□□ -0.55
PDPK1-201ENST00000268673 FCN3O75636 299 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 TCF15Q12870 199 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 TRGV4A0A0C4DH28 118 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE12JA6NER3 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE7O76087 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE12FP0CL80 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE12GP0CL81 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE12IP0CL82 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 GAGE4Q13068 117 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 SPXQ9BT56 116 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 TRAV8-3A0A0A6YYJ7 113 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 RNASE1P07998 156 aaKnown RBP11.61□□□□□ -0.55
PDPK1-201ENST00000268673 EML5Q05BV3 1969 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 J3QQQ9 107 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 OVOL3O00110 214 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 IGLV2-23P01705 113 aa11.61□□□□□ -0.55
PDPK1-201ENST00000268673 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
PDPK1-201ENST00000268673 SDHAF1A6NFY7 115 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 NPC2P61916 151 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
PDPK1-201ENST00000268673 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
PDPK1-201ENST00000268673 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
PDPK1-201ENST00000268673 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
PDPK1-201ENST00000268673 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 TEN1Q86WV5 123 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 CFHR4Q92496 578 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 AGPAT4-IT1Q9H0P7 198 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 GATA3P23771 443 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 CTSZQ9UBR2 303 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 FOXI1Q12951 378 aa11.6□□□□□ -0.55
PDPK1-201ENST00000268673 ATP6V0E1O15342 81 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 PTPRSQ13332 1948 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 IGHV1-69DA0A0B4J2H0 117 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 A0A0U1RRA0 63 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 IGHV1-69P01742 117 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
PDPK1-201ENST00000268673 MRPL53Q96EL3 112 aaKnown RBP11.59□□□□□ -0.55
PDPK1-201ENST00000268673 LENEPQ9Y5L5 61 aa11.59□□□□□ -0.55
PDPK1-201ENST00000268673 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.55
PDPK1-201ENST00000268673 ANXA2RQ3ZCQ2 193 aa11.58□□□□□ -0.55
PDPK1-201ENST00000268673 ATG2AQ2TAZ0 1938 aa11.58□□□□□ -0.56
PDPK1-201ENST00000268673 TRAV12-1A0A0B4J245 112 aa11.58□□□□□ -0.56
PDPK1-201ENST00000268673 RITA1Q96K30 269 aa11.58□□□□□ -0.56
PDPK1-201ENST00000268673 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
PDPK1-201ENST00000268673 IGFL2Q6UWQ7 119 aa11.58□□□□□ -0.56
PDPK1-201ENST00000268673 ATP6V0E2Q8NHE4 81 aa11.58□□□□□ -0.56
PDPK1-201ENST00000268673 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
PDPK1-201ENST00000268673 G3V318 75 aa11.57□□□□□ -0.56
PDPK1-201ENST00000268673 CFC1BP0CG36 223 aa11.57□□□□□ -0.56
PDPK1-201ENST00000268673 CFC1P0CG37 223 aa11.57□□□□□ -0.56
PDPK1-201ENST00000268673 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
PDPK1-201ENST00000268673 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms