RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
RTN1-201ENST00000267484 AMTNQ6UX39 209 aa12.9□□□□□ -0.35
RTN1-201ENST00000267484 RPL39LQ96EH5 51 aaKnown RBP12.89□□□□□ -0.35
RTN1-201ENST00000267484 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
RTN1-201ENST00000267484 OOSP1A8MZH6 123 aa12.89□□□□□ -0.35
RTN1-201ENST00000267484 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
RTN1-201ENST00000267484 TRBV12-3P01733 135 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 C1orf122Q6ZSJ8 110 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 HIF1ANQ9NWT6 349 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 EEF1AKMT3Q96AZ1 226 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 A0A087WX48 190 aa12.88□□□□□ -0.35
RTN1-201ENST00000267484 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
RTN1-201ENST00000267484 HIST1H4GQ99525 98 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 F6UB75 175 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 RAB9AP51151 201 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
RTN1-201ENST00000267484 WFDC2Q14508 124 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 TM2D2Q9BX73 214 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 SMPXQ9UHP9 88 aa12.87□□□□□ -0.35
RTN1-201ENST00000267484 NOTCH3Q9UM47 2321 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 H3BMG7 143 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 UBTD1Q9HAC8 227 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 SPG11Q96JI7 2443 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 IGLL5B9A064 214 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.86□□□□□ -0.35
RTN1-201ENST00000267484 UBE2E1P51965 193 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
RTN1-201ENST00000267484 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 SMIM2Q9BVW6 85 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 BPESC1Q9GZL8 116 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 TMEM238C9JI98 176 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 MGPP08493 103 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 RPL11P62913 178 aaKnown RBP12.85□□□□□ -0.35
RTN1-201ENST00000267484 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
RTN1-201ENST00000267484 S100A4P26447 101 aaKnown RBP12.84□□□□□ -0.35
RTN1-201ENST00000267484 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 RASL10AQ92737 203 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 SCGB3A1Q96QR1 104 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 WFDC12Q8WWY7 111 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 CYSLTR1Q9Y271 337 aa12.84□□□□□ -0.35
RTN1-201ENST00000267484 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 E9PLD3 99 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 GNRH2O43555 120 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
RTN1-201ENST00000267484 EMP1P54849 157 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
RTN1-201ENST00000267484 U3KQE9 123 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.82□□□□□ -0.36
RTN1-201ENST00000267484 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 SRD5A1P18405 259 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
RTN1-201ENST00000267484 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 ABCA2Q9BZC7 2435 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 F8VRH5 84 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 NPFFO15130 113 aa12.82□□□□□ -0.36
RTN1-201ENST00000267484 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
RTN1-201ENST00000267484 H7C1H1 209 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 Q5PR19 223 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 GTSF1LQ9H1H1 148 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 RAXQ9Y2V3 346 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 ARL3P36405 182 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 ETDBQ3ZM63 59 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 TRAV41A0A0B4J266 112 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 PLNP26678 52 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
RTN1-201ENST00000267484 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 OR11H1Q8NG94 326 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 CREBBPQ92793 2442 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 NBL1P41271 181 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 LMO4P61968 165 aa12.8□□□□□ -0.36
RTN1-201ENST00000267484 ITLN2Q8WWU7 325 aaPredicted RBP12.8□□□□□ -0.36
RTN1-201ENST00000267484 LY6EQ16553 131 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 PSMG4Q5JS54 123 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 C2orf66Q6UXQ4 117 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 MRAP2Q96G30 205 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 MUC4Q99102 2169 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
RTN1-201ENST00000267484 CRYBG3Q68DQ2 2970 aa12.79□□□□□ -0.36
RTN1-201ENST00000267484 MYMXA0A1B0GTQ4 84 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 RNF223E7ERA6 249 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 EDN2P20800 178 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 JPT2Q9H910 190 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms