RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ZNF705GA8MUZ8 300 aaPredicted RBP10.23□□□□□ -0.77
SSBP1-201ENST00000265304 DAZ2Q13117 558 aaKnown RBP10.23□□□□□ -0.77
SSBP1-201ENST00000265304 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
SSBP1-201ENST00000265304 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
SSBP1-201ENST00000265304 IGHV3OR16-12A0A075B7B8 117 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 SH2D1AO60880 128 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 PRM2P04554 102 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 CXCL1P09341 107 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 LINC00612Q8N6U2 182 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 SMIM7Q9BQ49 75 aa10.22□□□□□ -0.77
SSBP1-201ENST00000265304 NACAE9PAV3 2078 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 ZNF727A8MUV8 499 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 KRBOX1C9JBD0 128 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 K7EN84 100 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 SOHLH1Q5JUK2 328 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 FAM231DQ6ZW35 169 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 NHLRC2Q8NBF2 726 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 PTH2Q96A98 100 aa10.21□□□□□ -0.77
SSBP1-201ENST00000265304 TRGV11A0A075B6L2 103 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 A0A0J9YWU9 116 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 LYRM9A8MSI8 78 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 TCL1AP56279 114 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 SDF2L1Q9HCN8 221 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 DKK2Q9UBU2 259 aa10.2□□□□□ -0.78
SSBP1-201ENST00000265304 GNRH2O43555 120 aa10.19□□□□□ -0.78
SSBP1-201ENST00000265304 TYMSP04818 313 aa10.19□□□□□ -0.78
SSBP1-201ENST00000265304 MUC21Q5SSG8 566 aa10.19□□□□□ -0.78
SSBP1-201ENST00000265304 SPXQ9BT56 116 aa10.19□□□□□ -0.78
SSBP1-201ENST00000265304 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
SSBP1-201ENST00000265304 TIMM8BQ9Y5J9 83 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-201ENST00000265304 CBY3A6NI87 242 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 SFTA3P0C7M3 94 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
SSBP1-201ENST00000265304 LGALS9BQ3B8N2 356 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 C10orf91Q5T1B1 145 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 C9orf85Q96MD7 179 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 NDUFAF3Q9BU61 184 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 SSBP4Q9BWG4 385 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-201ENST00000265304 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
SSBP1-201ENST00000265304 CSMD3Q7Z407 3707 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 TMEM218A2RU14 115 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 SPINK4O60575 86 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 ORM1P02763 201 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 SPART-AS1P0CW21 52 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
SSBP1-201ENST00000265304 OR5I1Q13606 314 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 COMMD7Q86VX2 200 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 RASL10AQ92737 203 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 OSTCQ9NRP0 149 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
SSBP1-201ENST00000265304 B4DEV8 164 aa10.16□□□□□ -0.78
SSBP1-201ENST00000265304 DEFB4AO15263 64 aa10.16□□□□□ -0.78
SSBP1-201ENST00000265304 HTN1P15515 57 aa10.16□□□□□ -0.78
SSBP1-201ENST00000265304 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
SSBP1-201ENST00000265304 CT83Q5H943 113 aa10.16□□□□□ -0.78
SSBP1-201ENST00000265304 TENM2Q9NT68 2774 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 MGST1P10620 155 aaKnown RBP10.15□□□□□ -0.78
SSBP1-201ENST00000265304 CEBPGP53567 150 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
SSBP1-201ENST00000265304 C12orf74Q32Q52 190 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 ISOC2Q96AB3 205 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 WWC2-AS2Q96NR7 200 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 SEC11CQ9BY50 192 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
SSBP1-201ENST00000265304 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 SNAI2O43623 268 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 P01737 135 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 OR5AL1P0C617 328 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 IGLC6P0CF74 106 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 ADCYAP1P18509 176 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-201ENST00000265304 PNRC1Q12796 327 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-201ENST00000265304 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 DAZAP1Q96EP5 407 aaKnown RBP10.14□□□□□ -0.79
SSBP1-201ENST00000265304 NOP10Q9NPE3 64 aaKnown RBP10.14□□□□□ -0.79
SSBP1-201ENST00000265304 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
SSBP1-201ENST00000265304 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
SSBP1-201ENST00000265304 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
SSBP1-201ENST00000265304 M0R036 132 aa10.13□□□□□ -0.79
SSBP1-201ENST00000265304 M0R2P5 195 aa10.13□□□□□ -0.79
SSBP1-201ENST00000265304 ASIPP42127 132 aa10.13□□□□□ -0.79
SSBP1-201ENST00000265304 RPL19P84098 196 aaKnown RBP10.13□□□□□ -0.79
SSBP1-201ENST00000265304 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
SSBP1-201ENST00000265304 NXPH4O95158 308 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms