RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 C2orf70A6NJV1 201 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 SH2D1AO60880 128 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 CFC1BP0CG36 223 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 CFC1P0CG37 223 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 ZCCHC24Q8N2G6 241 aaKnown RBP4.58□□□□□ -1.68
VCAN-201ENST00000265077 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 IGHV1-3A0A0C4DH29 117 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 TMEM141Q96I45 108 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 FAM223BA6NKX1 122 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 ADARB2-AS1A8MUL3 147 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 FAM104BQ5XKR9 115 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 FAM223AQ8IWN6 122 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 C7orf69Q9H7B7 122 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 IGHV3OR16-8A0A075B7F1 116 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 TRAV3A0A0B4J244 114 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 HLA-DRB4P13762 266 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 Q6Q795 121 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 HLA-DRB4X5D2U9 266 aa4.58□□□□□ -1.68
VCAN-201ENST00000265077 TIMM23O14925 209 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 Q6ZS92 163 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 GAFA1Q96PS6 74 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 ARMS2P0C7Q2 107 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 TMEM200BQ69YZ2 307 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 RASL10AQ92737 203 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 NDUFC2-KCTD14E9PQ53 114 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 GATA4P43694 442 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 STHQ8IWL8 128 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 TRAV41A0A0B4J266 112 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 PRSS46E5RG02 174 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 JPT2Q9H910 190 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 IGKV2-40A0A087WW87 121 aaPredicted RBP4.57□□□□□ -1.68
VCAN-201ENST00000265077 TMEM213A2RRL7 107 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 WIPF3A6NGB9 483 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 IGKV2D-40P01614 121 aaPredicted RBP4.57□□□□□ -1.68
VCAN-201ENST00000265077 TP73-AS1Q9UF72 201 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 MRPL35Q9NZE8 188 aaKnown RBP4.57□□□□□ -1.68
VCAN-201ENST00000265077 hADV29S1A0JD25 119 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 DSCR9P59020 149 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 TRGV4A0A0C4DH28 118 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 PINLYPA6NC86 204 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 IGHG2P01859 326 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 C14orf178Q8N769 122 aaPredicted RBP4.57□□□□□ -1.68
VCAN-201ENST00000265077 TINCRA0A1B0GVN0 87 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 SRRM4A7MD48 611 aaKnown RBP4.57□□□□□ -1.68
VCAN-201ENST00000265077 CRLF1O75462 422 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 FHL1Q13642 323 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 IGKV3D-20A0A0C4DH25 116 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 CXCL5P42830 114 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
VCAN-201ENST00000265077 ERCC8Q13216 396 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 FOXG1P55316 489 aaPredicted RBP4.56□□□□□ -1.68
VCAN-201ENST00000265077 TMEM14CQ9P0S9 112 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 H3BT86 120 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 ZNF581Q9P0T4 197 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 BUB1B-PAK6H3BSN5 160 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 C20orf204Q6ZNR8 217 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 PAX4O43316 350 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 LINC01620Q4KN68 170 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 CD177Q8N6Q3 437 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 RETNQ9HD89 108 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.56□□□□□ -1.68
VCAN-201ENST00000265077 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 Q8N8P6 123 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.56□□□□□ -1.68
VCAN-201ENST00000265077 VWC2LB2RUY7 222 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 CSRP1P21291 193 aaKnown RBP4.56□□□□□ -1.68
VCAN-201ENST00000265077 E9PLN8 166 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 K7EMI3 77 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 PF4P02776 101 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 CRYGBP07316 175 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 CD24P25063 80 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 Q8N1Y9 231 aa4.56□□□□□ -1.68
VCAN-201ENST00000265077 INSP01308 110 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 LTAP01374 205 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IGHV3-11P01762 117 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 PFN2P35080 140 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IGLC6P0CF74 106 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IL17RELQ6ZVW7 336 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 ZNF672Q499Z4 452 aaPredicted RBP4.55□□□□□ -1.68
VCAN-201ENST00000265077 ZNF876PQ49A33 203 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 TRBV10-2A0A0K0K1G8 114 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 VMO1Q7Z5L0 202 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 RS1O15537 224 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 C10orf55Q5SWW7 151 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IMUPQ9GZP8 106 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IGHV3OR16-10A0A075B7F0 116 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 A0A087WX48 190 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 RPL36AP83881 106 aaKnown RBP4.55□□□□□ -1.68
VCAN-201ENST00000265077 MDS2Q8NDY4 140 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 RPL36ALQ969Q0 106 aaKnown RBP4.55□□□□□ -1.68
VCAN-201ENST00000265077 Q8TCH9 128 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms