RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 SAMD5Q5TGI4 173 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 Q8N2B8 174 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 NAV2Q8IVL1 2488 aa9.75□□□□□ -0.85
SPTLC1-201ENST00000262554 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 A0A087WW49 117 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 H3BVH4 76 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 APRG1Q8IVJ8 170 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 MS4A6AQ9H2W1 248 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 OR4C46A6NHA9 309 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 M0R143 59 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 MRPL52Q86TS9 123 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 DUX5Q96PT3 197 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 UQCR10Q9UDW1 63 aa9.74□□□□□ -0.85
SPTLC1-201ENST00000262554 ZANQ9Y493 2812 aa9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 S100A4P26447 101 aaKnown RBP9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 ASIPP42127 132 aa9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 WFDC11Q8NEX6 87 aa9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 ABCA12Q86UK0 2595 aa9.73□□□□□ -0.85
SPTLC1-201ENST00000262554 J3QKU1 62 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 TNFRSF6BO95407 300 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 IGLC3P0DOY3 106 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 EVI2AP22794 236 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 TFPI2P48307 235 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 ANXA2RQ3ZCQ2 193 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 TMEM86BQ8N661 226 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 EREGO14944 169 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 HBDP02042 147 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 SNHG12Q9BXW3 62 aa9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-201ENST00000262554 A0A096LNJ9 63 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 KLLNB2CW77 178 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 H0Y8G0 127 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 K7EQG2 157 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 ZNF688P0C7X2 276 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 PSMG4Q5JS54 123 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 LURAP1LQ8IV03 231 aa9.71□□□□□ -0.85
SPTLC1-201ENST00000262554 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 IGLL1P15814 213 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 CREBBPQ92793 2442 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 APCP25054 2843 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 LEPP41159 167 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 Q6ZN92 141 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 OR2K2Q8NGT1 345 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 ODF3Q96PU9 254 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 DOPEY2Q9Y3R5 2298 aa9.7□□□□□ -0.86
SPTLC1-201ENST00000262554 M0R381 172 aa9.69□□□□□ -0.86
SPTLC1-201ENST00000262554 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
SPTLC1-201ENST00000262554 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
SPTLC1-201ENST00000262554 A0A0J9YX75 114 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 A0A1B0GV90 55 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 TCTEX1D4Q5JR98 221 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 ST20Q9HBF5 79 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 LINC01619G3V211 115 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 GNRH2O43555 120 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 SLURP1P55000 103 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 FXYD7P58549 80 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 Q8N8P6 123 aa9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 MCRIP2Q9BUT9 160 aaKnown RBP9.68□□□□□ -0.86
SPTLC1-201ENST00000262554 MXRA5Q9NR99 2828 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 C7orf71A4D174 169 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 NRACQ8N912 160 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 DPF1Q92782 380 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 DPH3P1Q9H4G8 78 aa9.67□□□□□ -0.86
SPTLC1-201ENST00000262554 hDV102S1A0JD36 115 aa9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 DNAJC9-AS1A6NH13 148 aa9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 FCER1GP30273 86 aa9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 OR11H1Q8NG94 326 aa9.66□□□□□ -0.86
SPTLC1-201ENST00000262554 WFDC12Q8WWY7 111 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms