RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 SMR3AQ99954 134 aa17.98■□□□□ 0.47
TSPAN13-201ENST00000262067 FASNP49327 2511 aaKnown RBP17.98■□□□□ 0.47
TSPAN13-201ENST00000262067 WFDC12Q8WWY7 111 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 OR5AL1P0C617 328 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 C3orf79P0CE67 100 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 DMRTA1Q5VZB9 504 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 ORMDL3Q8N138 153 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 PRELID3AQ96N28 172 aa17.97■□□□□ 0.47
TSPAN13-201ENST00000262067 Q8N976 141 aa17.96■□□□□ 0.47
TSPAN13-201ENST00000262067 DLX4Q92988 240 aaPredicted RBP17.96■□□□□ 0.47
TSPAN13-201ENST00000262067 RNF185Q96GF1 192 aa17.96■□□□□ 0.47
TSPAN13-201ENST00000262067 SNAI2O43623 268 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 RNASE1P07998 156 aaKnown RBP17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 ANXA2RQ3ZCQ2 193 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 OR9G4Q8NGQ1 327 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 IGHV1-24A0A0C4DH33 117 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 A0A0J9YX75 114 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 KLLNB2CW77 178 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 SMKR1H3BMG3 65 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 H3BVH4 76 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 RAB4AP20338 218 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 C11orf44Q8N8P7 122 aa17.95■□□□□ 0.46
TSPAN13-201ENST00000262067 HECTD1Q9ULT8 2610 aa17.94■□□□□ 0.46
TSPAN13-201ENST00000262067 PEMTQ9UBM1 199 aa17.94■□□□□ 0.46
TSPAN13-201ENST00000262067 TSTD3H0UI37 97 aa17.94■□□□□ 0.46
TSPAN13-201ENST00000262067 CKS2P33552 79 aa17.94■□□□□ 0.46
TSPAN13-201ENST00000262067 ANK3Q12955 4377 aaKnown RBP17.93■□□□□ 0.46
TSPAN13-201ENST00000262067 SCGB2A2Q13296 93 aa17.93■□□□□ 0.46
TSPAN13-201ENST00000262067 EBLN2Q6P2I7 272 aa17.93■□□□□ 0.46
TSPAN13-201ENST00000262067 TIMM8BQ9Y5J9 83 aaPredicted RBP17.93■□□□□ 0.46
TSPAN13-201ENST00000262067 CUBNO60494 3623 aa17.93■□□□□ 0.46
TSPAN13-201ENST00000262067 NCR2O95944 276 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 CD28P10747 220 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 PRSS3P2Q8NHM4 247 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 IGHV4-4A0A075B6R2 117 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 TDRG1Q3Y452 100 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 TEX43Q6ZNM6 134 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 LINC01006Q8NI28 216 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 TMEM160Q9NX00 188 aa17.92■□□□□ 0.46
TSPAN13-201ENST00000262067 LOC389332A0A1B0GUA5 103 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 IGKV3-20P01619 116 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 EVI2AP22794 236 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 IFI27P40305 119 aaPredicted RBP17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 SPANXN1Q5VSR9 72 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 GNRH2O43555 120 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 NPYP01303 97 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 CACNG7P62955 275 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 RAX2Q96IS3 184 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 C16orf95Q9H693 158 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 SIGLEC8Q9NYZ4 499 aa17.91■□□□□ 0.46
TSPAN13-201ENST00000262067 A0A1W2PRX2 142 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 SPRY2O43597 315 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 GAS8-AS1O95177 125 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 ASIPP42127 132 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 ZNF418Q8TF45 676 aaPredicted RBP17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 AP5S1Q9NUS5 200 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 NF1P21359 2839 aa17.9■□□□□ 0.46
TSPAN13-201ENST00000262067 S100A4P26447 101 aaKnown RBP17.89■□□□□ 0.45
TSPAN13-201ENST00000262067 FA2HQ7L5A8 372 aa17.89■□□□□ 0.45
TSPAN13-201ENST00000262067 ODF3Q96PU9 254 aa17.89■□□□□ 0.45
TSPAN13-201ENST00000262067 LEPP41159 167 aa17.88■□□□□ 0.45
TSPAN13-201ENST00000262067 HILS1P60008 231 aa17.88■□□□□ 0.45
TSPAN13-201ENST00000262067 LINC00173Q6ZV60 143 aa17.88■□□□□ 0.45
TSPAN13-201ENST00000262067 TRAV12-3A0A0B4J271 114 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 TMEM61Q8N0U2 210 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 LEPROTL1O95214 131 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 LY6G6DO95868 133 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 PPBPP02775 128 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 BTF3P20290 206 aaKnown RBP17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 FOXI2Q6ZQN5 318 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 SMIM15Q7Z3B0 74 aa17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 CITED2Q99967 270 aaPredicted RBP17.87■□□□□ 0.45
TSPAN13-201ENST00000262067 C7orf71A4D174 169 aa17.86■□□□□ 0.45
TSPAN13-201ENST00000262067 DDTP30046 118 aa17.86■□□□□ 0.45
TSPAN13-201ENST00000262067 SCRT2Q9NQ03 307 aa17.86■□□□□ 0.45
TSPAN13-201ENST00000262067 DUSP14O95147 198 aaKnown RBP17.86■□□□□ 0.45
TSPAN13-201ENST00000262067 RNASE3P12724 160 aaKnown RBP17.86■□□□□ 0.45
TSPAN13-201ENST00000262067 TRAV12-2A0A075B6T6 113 aa17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 M0R381 172 aa17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 TCF21O43680 179 aa17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 GATA1P15976 413 aaPredicted RBP17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 FAM159AQ6UWV7 190 aa17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 DYNLRB2Q8TF09 96 aa17.85■□□□□ 0.45
TSPAN13-201ENST00000262067 MED14OSP0DP75 135 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 FHL3Q13643 280 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 DEFB114Q30KQ6 69 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 PHLDA3Q9Y5J5 127 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 MTORP42345 2549 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 CCL24O00175 119 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 DEFB131AP59861 70 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 SPINK13Q1W4C9 94 aa17.84■□□□□ 0.45
TSPAN13-201ENST00000262067 SPATA12Q7Z6I5 190 aa17.83■□□□□ 0.45
TSPAN13-201ENST00000262067 TMEM70Q9BUB7 260 aa17.83■□□□□ 0.45
TSPAN13-201ENST00000262067 TRAV2A0A0B4J234 112 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 KIR2DL5BA0A0G2JN68 375 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 KIR2DL5BA0A0G2JPC4 375 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 KNCNA6PVL3 124 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 TNFRSF6BO95407 300 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 CDKN1BP46527 198 aa17.83■□□□□ 0.44
TSPAN13-201ENST00000262067 AMTNQ6UX39 209 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms