RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
FOXA1-201ENST00000250448 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
FOXA1-201ENST00000250448 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
FOXA1-201ENST00000250448 LINC01546A6NGU7 62 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 IGHG4P01861 327 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 ZNF575Q86XF7 245 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 SMAD5-AS1Q9Y6J3 95 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 A0A1W2PPM0 123 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 ORM1P02763 201 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 TTC9CQ8N5M4 171 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
FOXA1-201ENST00000250448 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 CNFNQ9BYD5 112 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 UNC79Q9P2D8 2635 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 GAS8-AS1O95177 125 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 LEPP41159 167 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
FOXA1-201ENST00000250448 FCER1GP30273 86 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 DSCR9P59020 149 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 CKS1BP61024 79 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 TMEM219Q86XT9 240 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 A0A096LNT2 108 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 IGHV1-69DA0A0B4J2H0 117 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 IGHV1-69P01742 117 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 B4DSR2 109 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 TNFRSF6BO95407 300 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 SLC25A16P16260 332 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
FOXA1-201ENST00000250448 SS18L2Q9UHA2 77 aa13.06□□□□□ -0.32
FOXA1-201ENST00000250448 IGKV2D-26A0A0A0MRZ7 120 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 A4D1N5 150 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 G3V4G9 280 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 CTSGP08311 255 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 EVI2AP22794 236 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 Q8N6K4 173 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 HIGD1BQ9P298 99 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 MXRA5Q9NR99 2828 aa13.05□□□□□ -0.32
FOXA1-201ENST00000250448 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
FOXA1-201ENST00000250448 TGFAP01135 160 aa13.04□□□□□ -0.32
FOXA1-201ENST00000250448 CR1P17927 2039 aa13.04□□□□□ -0.32
FOXA1-201ENST00000250448 AZU1P20160 251 aa13.04□□□□□ -0.32
FOXA1-201ENST00000250448 FLNAP21333 2647 aaKnown RBP13.03□□□□□ -0.32
FOXA1-201ENST00000250448 SMIM13P0DJ93 91 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 FABP2P12104 132 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 GCSHP23434 173 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 ERCC8Q13216 396 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 Q96MF0 132 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 HHLA3Q9XRX5 114 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 PDZD2O15018 2839 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 SONP18583 2426 aaKnown RBP13.03□□□□□ -0.32
FOXA1-201ENST00000250448 IGHV3OR16-8A0A075B7F1 116 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 PRSS1P07477 247 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 SPXQ9BT56 116 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 IGKCP01834 107 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 FXYD2P54710 66 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
FOXA1-201ENST00000250448 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
FOXA1-201ENST00000250448 EBI3Q14213 229 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 Q8N9W7 124 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 FOXC2Q99958 501 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 NOTCH2Q04721 2471 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 PPIFP30405 207 aaKnown RBP13.02□□□□□ -0.33
FOXA1-201ENST00000250448 LY6EQ16553 131 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 ACANP16112 2415 aa13.02□□□□□ -0.33
FOXA1-201ENST00000250448 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
FOXA1-201ENST00000250448 LINC01356Q8N9X3 169 aa13.01□□□□□ -0.33
FOXA1-201ENST00000250448 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
FOXA1-201ENST00000250448 Q8N8P6 123 aa13.01□□□□□ -0.33
FOXA1-201ENST00000250448 BEX4Q9NWD9 120 aaPredicted RBP13.01□□□□□ -0.33
FOXA1-201ENST00000250448 TRBV7-9A0A0J9YWB2 115 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 ATP5LO75964 103 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 DPM2O94777 84 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 GTSCR1Q86UQ5 136 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 KRTAP1-3Q8IUG1 177 aa13□□□□□ -0.33
FOXA1-201ENST00000250448 IGLV2-18A0A075B6J9 118 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 IGHV7-81A0A0B4J1V7 117 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 RBAKDNA6NC62 111 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 K7ERJ3 54 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
FOXA1-201ENST00000250448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms