RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 A0A087WX48 190 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 LINC01549A6NIU2 74 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 ODF3L1Q8IXM7 274 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 CST9LQ9H4G1 147 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 COX8AP10176 69 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 PLEKHB2Q96CS7 222 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 ZNF747Q9BV97 191 aa13.47□□□□□ -0.25
SLC1A4-201ENST00000234256 LINC01356Q8N9X3 169 aa13.46□□□□□ -0.25
SLC1A4-201ENST00000234256 TCTEX1D4Q5JR98 221 aa13.46□□□□□ -0.25
SLC1A4-201ENST00000234256 DLX4Q92988 240 aaPredicted RBP13.46□□□□□ -0.25
SLC1A4-201ENST00000234256 CFHR3Q02985 330 aa13.46□□□□□ -0.26
SLC1A4-201ENST00000234256 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.26
SLC1A4-201ENST00000234256 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.26
SLC1A4-201ENST00000234256 PAX4O43316 350 aa13.46□□□□□ -0.26
SLC1A4-201ENST00000234256 GP9P14770 177 aa13.46□□□□□ -0.26
SLC1A4-201ENST00000234256 SMIM2Q9BVW6 85 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 GNRH2O43555 120 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 MORN3Q6PF18 240 aaPredicted RBP13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 TIMM21Q9BVV7 248 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 PCP2Q8IVA1 136 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 ZNF295-AS1Q8N0V1 137 aa13.45□□□□□ -0.26
SLC1A4-201ENST00000234256 LGALS9BQ3B8N2 356 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 LGALS9CQ6DKI2 356 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 C22orf34Q6ZV56 151 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 I3L2K1 104 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 OCIAD2Q56VL3 154 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 PRADC1Q9BSG0 188 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 C9JAW5 83 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 K7ERJ3 54 aa13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 SP5Q6BEB4 398 aaPredicted RBP13.44□□□□□ -0.26
SLC1A4-201ENST00000234256 BLCAPP62952 87 aa13.43□□□□□ -0.26
SLC1A4-201ENST00000234256 IGHV7-81A0A0B4J1V7 117 aa13.43□□□□□ -0.26
SLC1A4-201ENST00000234256 NDUFA4O00483 81 aa13.43□□□□□ -0.26
SLC1A4-201ENST00000234256 CFHR4Q92496 578 aa13.43□□□□□ -0.26
SLC1A4-201ENST00000234256 INSP01308 110 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 TCF15Q12870 199 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 KIR2DL5BA0A0G2JN68 375 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 KIR2DL5BA0A0G2JPC4 375 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RBMY1BA6NDE4 496 aaKnown RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RBMY1EA6NEQ0 496 aaKnown RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RBMY1DP0C7P1 496 aaKnown RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RBMY1A1P0DJD3 496 aaKnown RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RBMY1CP0DJD4 496 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 CKS1BP61024 79 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 KIR2DL5AQ8N109 375 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 GTSF1Q8WW33 167 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 NCKAP5O14513 1909 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 LAMA3Q16787 3333 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 CTSGP08311 255 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 RNASE13Q5GAN3 156 aaKnown RBP13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 GATD1Q8NB37 220 aa13.42□□□□□ -0.26
SLC1A4-201ENST00000234256 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 NDUFS8O00217 210 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 DEFB1P60022 68 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 FASNP49327 2511 aaKnown RBP13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 IGHV1OR15-1A0A075B7D0 117 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 GAGE12JA6NER3 117 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 GAGE1Q13065 139 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 GAGE4Q13068 117 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 GAGE5Q13069 117 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 TTTY13Q9BZ97 58 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 F8VRH5 84 aa13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 TRPT1Q86TN4 253 aaKnown RBP13.41□□□□□ -0.26
SLC1A4-201ENST00000234256 CENPVL3A0A0U1RRI6 287 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 C6orf226Q5I0X4 101 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 C2orf82Q6UX34 121 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 IGLV1-47P01700 117 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 CDKN1BP46527 198 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 IGHV4-61A0A0C4DH41 118 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 IGHV4-59P01825 116 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 PMVKQ15126 192 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 C8orf31Q8N9H6 132 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 ATXN8Q156A1 80 aa13.4□□□□□ -0.26
SLC1A4-201ENST00000234256 HOXB4P17483 251 aaPredicted RBP13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 ANAPC13Q9BS18 74 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 C9orf118A6NHY6 69 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 NBL1P41271 181 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 WIPF2Q8TF74 440 aaPredicted RBP13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 KIAA1549Q9HCM3 1950 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 HCFC1P51610 2035 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 POLQO75417 2590 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 C1orf229Q6ZS94 237 aaPredicted RBP13.39□□□□□ -0.27
SLC1A4-201ENST00000234256 IGF2BP2-AS1Q96M15 143 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms