RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 MDFICQ9P1T7 246 aa14.12□□□□□ -0.15
HOXA6-201ENST00000222728 TIMM8BQ9Y5J9 83 aaPredicted RBP14.12□□□□□ -0.15
HOXA6-201ENST00000222728 NACAE9PAV3 2078 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 TRBV20OR9-2A0A075B6H5 130 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 TYMSP04818 313 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 GNG4P50150 75 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 SRSF3P84103 164 aaKnown RBP14.11□□□□□ -0.15
HOXA6-201ENST00000222728 TDRG1Q3Y452 100 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 FAM162BQ5T6X4 162 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 PARLQ9H300 379 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 SDF2L1Q9HCN8 221 aa14.11□□□□□ -0.15
HOXA6-201ENST00000222728 TMEM250H0YL14 139 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 IGLV2-8P01709 118 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 SRP19P09132 144 aaKnown RBP14.1□□□□□ -0.15
HOXA6-201ENST00000222728 DEFB130BP0DP73 79 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 DEFB130AP0DP74 79 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 MGST1P10620 155 aaKnown RBP14.1□□□□□ -0.15
HOXA6-201ENST00000222728 ZNF415Q09FC8 603 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 PRR27Q6MZM9 219 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 Q6ZTC4 211 aa14.1□□□□□ -0.15
HOXA6-201ENST00000222728 STARD9Q9P2P6 4700 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 TRGV11A0A075B6L2 103 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 IGKV3D-20A0A0C4DH25 116 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 LYRM9A8MSI8 78 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 M0R036 132 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 ORM1P02763 201 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 TCL1AP56279 114 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 DAD1P61803 113 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 IBA57Q5T440 356 aaKnown RBP14.09□□□□□ -0.15
HOXA6-201ENST00000222728 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
HOXA6-201ENST00000222728 IGHV3-16A0A0C4DH30 117 aa14.08□□□□□ -0.16
HOXA6-201ENST00000222728 TEX48A0A1B0GUV7 120 aa14.08□□□□□ -0.16
HOXA6-201ENST00000222728 C9JQL5 133 aa14.08□□□□□ -0.16
HOXA6-201ENST00000222728 CLLU1Q5K131 121 aa14.08□□□□□ -0.16
HOXA6-201ENST00000222728 TMSB15BA0A087X1C1 80 aa14.07□□□□□ -0.16
HOXA6-201ENST00000222728 B4DEV8 164 aa14.07□□□□□ -0.16
HOXA6-201ENST00000222728 DAZ2Q13117 558 aaKnown RBP14.07□□□□□ -0.16
HOXA6-201ENST00000222728 Q6ZTI0 123 aa14.07□□□□□ -0.16
HOXA6-201ENST00000222728 PHLDA1Q8WV24 401 aaPredicted RBP14.07□□□□□ -0.16
HOXA6-201ENST00000222728 TRGV1A0A0A0MS02 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 GAGE12BA1L429 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 GAGE7O76087 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 GAGE12FP0CL80 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 GAGE12GP0CL81 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 GAGE12IP0CL82 117 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 PEA15Q15121 130 aa14.06□□□□□ -0.16
HOXA6-201ENST00000222728 MRPL16Q9NX20 251 aaKnown RBP14.06□□□□□ -0.16
HOXA6-201ENST00000222728 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
HOXA6-201ENST00000222728 C3orf84H3BNL1 204 aa14.05□□□□□ -0.16
HOXA6-201ENST00000222728 HTN3P15516 51 aa14.05□□□□□ -0.16
HOXA6-201ENST00000222728 RPL19P84098 196 aaKnown RBP14.05□□□□□ -0.16
HOXA6-201ENST00000222728 OR5I1Q13606 314 aa14.05□□□□□ -0.16
HOXA6-201ENST00000222728 TENM2Q9NT68 2774 aa14.05□□□□□ -0.16
HOXA6-201ENST00000222728 DYNC2H1Q8NCM8 4307 aaKnown RBP14.04□□□□□ -0.16
HOXA6-201ENST00000222728 GRIFINA4D1Z8 144 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 C9JCJ5 164 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 SPINK4O60575 86 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 NDUFS6O75380 124 aaKnown RBP14.04□□□□□ -0.16
HOXA6-201ENST00000222728 CASC10Q5T4H9 136 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 OCC1Q8TAD7 63 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 SMIM7Q9BQ49 75 aa14.04□□□□□ -0.16
HOXA6-201ENST00000222728 K7EN84 100 aa14.03□□□□□ -0.16
HOXA6-201ENST00000222728 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
HOXA6-201ENST00000222728 ZNF575Q86XF7 245 aa14.03□□□□□ -0.16
HOXA6-201ENST00000222728 LINC00612Q8N6U2 182 aa14.03□□□□□ -0.16
HOXA6-201ENST00000222728 SMIM12Q96EX1 92 aa14.03□□□□□ -0.16
HOXA6-201ENST00000222728 DEFB131BA0A096LNP1 70 aa14.02□□□□□ -0.17
HOXA6-201ENST00000222728 TRAV10A0A0B4J240 114 aa14.02□□□□□ -0.17
HOXA6-201ENST00000222728 ZNF727A8MUV8 499 aa14.02□□□□□ -0.17
HOXA6-201ENST00000222728 RNASE3P12724 160 aaKnown RBP14.02□□□□□ -0.17
HOXA6-201ENST00000222728 ASIPP42127 132 aa14.02□□□□□ -0.17
HOXA6-201ENST00000222728 CEMP1Q6PRD7 247 aaPredicted RBP14.02□□□□□ -0.17
HOXA6-201ENST00000222728 H3BVH4 76 aa14.01□□□□□ -0.17
HOXA6-201ENST00000222728 S100A4P26447 101 aaKnown RBP14.01□□□□□ -0.17
HOXA6-201ENST00000222728 C9orf85Q96MD7 179 aa14.01□□□□□ -0.17
HOXA6-201ENST00000222728 SPXQ9BT56 116 aa14.01□□□□□ -0.17
HOXA6-201ENST00000222728 C19orf71A6NCJ1 209 aa14□□□□□ -0.17
HOXA6-201ENST00000222728 NUPR2A6NF83 97 aa14□□□□□ -0.17
HOXA6-201ENST00000222728 DAZAP1Q96EP5 407 aaKnown RBP14□□□□□ -0.17
HOXA6-201ENST00000222728 SMDT1Q9H4I9 107 aa14□□□□□ -0.17
HOXA6-201ENST00000222728 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
HOXA6-201ENST00000222728 M0R2P5 195 aa13.99□□□□□ -0.17
HOXA6-201ENST00000222728 LGALS9BQ3B8N2 356 aa13.99□□□□□ -0.17
HOXA6-201ENST00000222728 RNASE7Q9H1E1 156 aaKnown RBP13.99□□□□□ -0.17
HOXA6-201ENST00000222728 BIN3Q9NQY0 253 aa13.99□□□□□ -0.17
HOXA6-201ENST00000222728 ATP5G1P05496 136 aa13.98□□□□□ -0.17
HOXA6-201ENST00000222728 F5H768 121 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 P01737 135 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 IGHV3-53P01767 116 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 ARMS2P0C7Q2 107 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 GZMBP10144 247 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 DNLZQ5SXM8 178 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 NUDT10Q8NFP7 164 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 OR2D3Q8NGH3 330 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 NUDT11Q96G61 164 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 IL36BQ9NZH7 164 aa13.97□□□□□ -0.17
HOXA6-201ENST00000222728 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.17
HOXA6-201ENST00000222728 IGLL5B9A064 214 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 ZNF876PQ49A33 203 aa13.96□□□□□ -0.17
HOXA6-201ENST00000222728 FAM74A3Q4VXF1 159 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms