RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CACNA1AO00555 2505 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
CNOT3-201ENST00000221232 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 TRAV8-6A0A0B4J262 113 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
CNOT3-201ENST00000221232 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 U3KQE9 123 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
CNOT3-201ENST00000221232 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 FCER1GP30273 86 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 CNFNQ9BYD5 112 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
CNOT3-201ENST00000221232 AVPP01185 164 aa11.12□□□□□ -0.63
CNOT3-201ENST00000221232 PPBPP02775 128 aa11.12□□□□□ -0.63
CNOT3-201ENST00000221232 C9orf47Q6ZRZ4 202 aa11.12□□□□□ -0.63
CNOT3-201ENST00000221232 K7EP13 123 aa11.12□□□□□ -0.63
CNOT3-201ENST00000221232 GNRH2O43555 120 aa11.12□□□□□ -0.63
CNOT3-201ENST00000221232 A1L4Q6 167 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 K7EMI3 77 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
CNOT3-201ENST00000221232 MYO18BQ8IUG5 2567 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 RIPPLY3P57055 190 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
CNOT3-201ENST00000221232 SORL1Q92673 2214 aa11.11□□□□□ -0.63
CNOT3-201ENST00000221232 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
CNOT3-201ENST00000221232 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 C10orf105Q8TEF2 133 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 CD5LO43866 347 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 MGPP08493 103 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 ZANQ9Y493 2812 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 ODF1Q14990 250 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 CUBNO60494 3623 aa11.1□□□□□ -0.63
CNOT3-201ENST00000221232 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
CNOT3-201ENST00000221232 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
CNOT3-201ENST00000221232 Q8N8P6 123 aa11.09□□□□□ -0.63
CNOT3-201ENST00000221232 NRACQ8N912 160 aa11.09□□□□□ -0.63
CNOT3-201ENST00000221232 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
CNOT3-201ENST00000221232 ACACBO00763 2458 aa11.08□□□□□ -0.63
CNOT3-201ENST00000221232 KLK9Q2XQG4 91 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 ZC2HC1BQ5TFG8 222 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
CNOT3-201ENST00000221232 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
CNOT3-201ENST00000221232 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 H3BUT2 72 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 NDUFA4O00483 81 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 LAGE3Q14657 143 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 IGKCP01834 107 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 MSMBP08118 114 aa11.07□□□□□ -0.64
CNOT3-201ENST00000221232 IGHG2P01859 326 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 GCSHP23434 173 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 A6NDX4 124 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 MRPL53Q96EL3 112 aaKnown RBP11.06□□□□□ -0.64
CNOT3-201ENST00000221232 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 IGSF10Q6WRI0 2623 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
CNOT3-201ENST00000221232 TRAV21A0A0B4J279 112 aa11.05□□□□□ -0.64
CNOT3-201ENST00000221232 DPF1Q92782 380 aa11.05□□□□□ -0.64
CNOT3-201ENST00000221232 JPT2Q9H910 190 aa11.05□□□□□ -0.64
CNOT3-201ENST00000221232 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
CNOT3-201ENST00000221232 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
CNOT3-201ENST00000221232 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
CNOT3-201ENST00000221232 SOCS3O14543 225 aa11.04□□□□□ -0.64
CNOT3-201ENST00000221232 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
CNOT3-201ENST00000221232 ASIPP42127 132 aa11.04□□□□□ -0.64
CNOT3-201ENST00000221232 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNOT3-201ENST00000221232 DPM2O94777 84 aa11.04□□□□□ -0.64
CNOT3-201ENST00000221232 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
CNOT3-201ENST00000221232 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 OVOL1O14753 267 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 USMG5Q96IX5 58 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 DOPEY1Q5JWR5 2465 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 K7ERJ3 54 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 SEC11AP67812 179 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 MAPKAPK5-AS1Q8N8E1 139 aa11.03□□□□□ -0.64
CNOT3-201ENST00000221232 RASL10AQ92737 203 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms