RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 WDR86Q86TI4 376 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 DMRTC2Q8IXT2 367 aaPredicted RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 C11orf44Q8N8P7 122 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 ATOX1O00244 68 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 PDE6GP18545 87 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 COL4A3Q01955 1670 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 C12orf74Q32Q52 190 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE12JA6NER3 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE7O76087 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GAGE4Q13068 117 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 NDUFA12Q9UI09 145 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 DKK1O94907 266 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 PRSS57Q6UWY2 283 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 TEN1Q86WV5 123 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 H3BUX3 64 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 NPSP0C0P6 89 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 GP9P14770 177 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 PPIFP30405 207 aaKnown RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 FOXG1P55316 489 aaPredicted RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 E7EQL1 145 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 MSMBP08118 114 aa3.5□□□□□ -1.85
CHD9-201ENST00000219084 RSPO1Q2MKA7 263 aaPredicted RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 TSSC4Q9Y5U2 329 aaPredicted RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 MRPL35Q9NZE8 188 aaKnown RBP3.5□□□□□ -1.85
CHD9-201ENST00000219084 LY6G6EA0A0G2JKS1 128 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 ATP6V0E1O15342 81 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 GAGE5Q13069 117 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 GAGE6Q13070 117 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 SLC25A29Q8N8R3 303 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 LINC00574Q9H8X3 128 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 U3KQA8 63 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 SAP30O75446 220 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 MSRB2Q9Y3D2 182 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 SMKR1H3BMG3 65 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CXCL5P42830 114 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 C9orf47Q6ZRZ4 202 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 C1orf159Q96HA4 380 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 LINC00479Q96M42 142 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 TIMM17AQ99595 171 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 ORMDL1Q9P0S3 153 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CRYBA4P53673 196 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 TCF15Q12870 199 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 RNF144BQ7Z419 303 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 TOMM6Q96B49 74 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CARD19Q96LW7 228 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 ANKHD1Q8IWZ3 2542 aaKnown RBP3.49□□□□□ -1.85
CHD9-201ENST00000219084 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 IGHV3OR16-10A0A075B7F0 116 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 ODF3Q96PU9 254 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 NAV3Q8IVL0 2385 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 H3BT86 120 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CRYGCP07315 174 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 LY6DQ14210 128 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 IGFL2Q6UWQ7 119 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 ZNF491Q8N8L2 437 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 C11orf1Q9H5F2 150 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 MUC4Q99102 2169 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CFC1BP0CG36 223 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 CFC1P0CG37 223 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 MRPL23Q16540 153 aaKnown RBP3.49□□□□□ -1.85
CHD9-201ENST00000219084 Q6ZR03 302 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 KLHL30-AS1Q8NEE0 82 aa3.49□□□□□ -1.85
CHD9-201ENST00000219084 IGHV3OR16-8A0A075B7F1 116 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 C11orf86A6NJI1 115 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 ZNF581Q9P0T4 197 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 HOXB4P17483 251 aaPredicted RBP3.48□□□□□ -1.85
CHD9-201ENST00000219084 TCTEX1D4Q5JR98 221 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 LYPD2Q6UXB3 125 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 DPH3Q96FX2 82 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 A0A087WWL8 130 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 K7ENP7 123 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 PLA2G2CQ5R387 149 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 ZNF561-AS1K7EIQ3 104 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 NDPQ00604 133 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 CCL25O15444 150 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 TMEM219Q86XT9 240 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 J3KT08 172 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 TFF1P04155 84 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 ETDBQ3ZM63 59 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 ATP5EP2Q5VTU8 51 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 C16orf54Q6UWD8 224 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 CFHR4Q92496 578 aa3.48□□□□□ -1.85
CHD9-201ENST00000219084 CSPG4Q6UVK1 2322 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 SPATA25Q9BR10 227 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 G3V4G9 280 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 H7C423 109 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 K7EMT4 169 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 CD24P25063 80 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 C16orf74Q96GX8 76 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 NBASA2RRP1 2371 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 IGLV11-55A0A075B6I3 123 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms