RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SMR3AQ99954 134 aa7.34□□□□□ -1.23
PHGDH-215ENST00000641371 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 INAFM1C9JVW0 142 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 PRAC2D3DTV9 90 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 TCL1AP56279 114 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 IGFL4Q6B9Z1 124 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 GATD1Q8NB37 220 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 Q8TAT8 98 aa7.33□□□□□ -1.24
PHGDH-215ENST00000641371 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
PHGDH-215ENST00000641371 MTORP42345 2549 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-215ENST00000641371 APCSP02743 223 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CSN3P07498 182 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CD28P10747 220 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 HOXA5P20719 270 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CTRLP40313 264 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CRIP1P50238 77 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 RAB4BP61018 213 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 ERCC8Q13216 396 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
PHGDH-215ENST00000641371 TMEM136Q6ZRR5 245 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 DLX4Q92988 240 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-215ENST00000641371 RAX2Q96IS3 184 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 FAM19A4Q96LR4 140 aa7.32□□□□□ -1.24
PHGDH-215ENST00000641371 CITED2Q99967 270 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-215ENST00000641371 ORM1P02763 201 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 S100A2P29034 98 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 NDUFA6P56556 154 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
PHGDH-215ENST00000641371 DEFB136Q30KP8 78 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 OR10J3Q5JRS4 329 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 KCNS1Q96KK3 526 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 CNFNQ9BYD5 112 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 GPR61Q9BZJ8 451 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 C2CD3Q4AC94 2353 aa7.31□□□□□ -1.24
PHGDH-215ENST00000641371 IGKV3-7A0A075B6H7 116 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 A0A0J9YX75 114 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 GPX1P07203 203 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 ZNF688P0C7X2 276 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 CACNG7P62955 275 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 Q0VG73 95 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 DEFB114Q30KQ6 69 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 PSMG4Q5JS54 123 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 C18orf65Q6ZTR6 163 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 WFDC3Q8IUB2 231 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 ZFAND2AQ8N6M9 145 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 CLUHP3Q96NS8 147 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 FAM110AQ9BQ89 295 aa7.3□□□□□ -1.24
PHGDH-215ENST00000641371 A8MTW9 85 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 KLLNB2CW77 178 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 AMBPP02760 352 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 ZNF493Q6ZR52 646 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
PHGDH-215ENST00000641371 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-215ENST00000641371 OTOGQ6ZRI0 2925 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 SPINK4O60575 86 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 CDKN1BP46527 198 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 TFPI2P48307 235 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 CAMPP49913 170 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 INSL3P51460 131 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 ZNF80P51504 273 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-215ENST00000641371 ADAMTSL5Q6ZMM2 481 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 C20orf144Q9BQM9 153 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
PHGDH-215ENST00000641371 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 C7orf71A4D174 169 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 SNAI2O43623 268 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 PPBPP02775 128 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 PF4P02776 101 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 ESDP10768 282 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 ASIPP42127 132 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 RIPPLY3P57055 190 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 TMEM61Q8N0U2 210 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 TMEM18Q96B42 140 aa7.27□□□□□ -1.25
PHGDH-215ENST00000641371 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-215ENST00000641371 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-215ENST00000641371 IGHV4-4A0A075B6R2 117 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 IGKV3D-20A0A0C4DH25 116 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 ARMS2P0C7Q2 107 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 GZMBP10144 247 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 EDN2P20800 178 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 S100A4P26447 101 aaKnown RBP7.26□□□□□ -1.25
PHGDH-215ENST00000641371 TDRG1Q3Y452 100 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 CD300EQ496F6 205 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-215ENST00000641371 FAM159AQ6UWV7 190 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 BAGE3Q86Y29 109 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 HIST3H2BBQ8N257 126 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 C11orf44Q8N8P7 122 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms