RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 NXPH4O95158 308 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 SLAQ13239 276 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 ZC2HC1AQ96GY0 325 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 V9GYV3 84 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 NLRC5Q86WI3 1866 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
HNRNPU-226ENST00000640218 NBASA2RRP1 2371 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 RSPO3Q9BXY4 272 aaPredicted RBP11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 SPTAN1Q13813 2472 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 PLXNA2O75051 1894 aa11.67□□□□□ -0.54
HNRNPU-226ENST00000640218 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 ANAPC1Q9H1A4 1944 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 A8MWP6 167 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 NDUFS7O75251 213 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 KMT2EQ8IZD2 1858 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 HOXB4P17483 251 aaPredicted RBP11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 VOPP1Q96AW1 172 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 CLPSL2Q6UWE3 100 aa11.66□□□□□ -0.54
HNRNPU-226ENST00000640218 SIGLEC8Q9NYZ4 499 aa11.65□□□□□ -0.54
HNRNPU-226ENST00000640218 GRNP28799 593 aaKnown RBP11.65□□□□□ -0.55
HNRNPU-226ENST00000640218 COX11Q9Y6N1 276 aa11.65□□□□□ -0.55
HNRNPU-226ENST00000640218 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 C22orf46C9J442 243 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 C17orf77Q96MU5 243 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 GPR179Q6PRD1 2367 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 ELANEP08246 267 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 DEFB112Q30KQ8 113 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 SHISA9B4DS77 424 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 SOCS3O14543 225 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 PIP4P1Q86T03 277 aa11.64□□□□□ -0.55
HNRNPU-226ENST00000640218 NPYP01303 97 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 IGHV4-59P01825 116 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 H3BMM0 161 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 SPINK8P0C7L1 97 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 UBE2WQ96B02 151 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 KAAG1Q9UBP8 84 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 F6UB75 175 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 MORN5Q5VZ52 161 aa11.63□□□□□ -0.55
HNRNPU-226ENST00000640218 K7EM74 188 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 Q9HAA7 133 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 TRAV25A0A0B4J276 109 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 KLF5Q13887 457 aaPredicted RBP11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 SMIM2Q9BVW6 85 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 SCRT2Q9NQ03 307 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 CTSZQ9UBR2 303 aa11.62□□□□□ -0.55
HNRNPU-226ENST00000640218 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 GNRH2O43555 120 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 IGHV2-70P01814 119 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 MRPL53Q96EL3 112 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 NDUFS6O75380 124 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 IGLV3-1P01715 115 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 HOXD3P31249 432 aaPredicted RBP11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 Q6ZWC4 215 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 DEFB136Q30KP8 78 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 VPREB3Q9UKI3 123 aa11.61□□□□□ -0.55
HNRNPU-226ENST00000640218 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 TSSC4Q9Y5U2 329 aaPredicted RBP11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 A0A0J9YY99 117 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 FGF6P10767 208 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
HNRNPU-226ENST00000640218 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 WIPF3A6NGB9 483 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 CCL24O00175 119 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 RMI2Q96E14 147 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 FOXE3Q13461 319 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 H3BUA1 57 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 NOTCH4Q99466 2003 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 TRBV20-1A0A075B6N2 111 aa11.59□□□□□ -0.55
HNRNPU-226ENST00000640218 IGLC7A0M8Q6 106 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms