RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276		U3KQE9	123 aa		13.15	□□□□□ -0.31
CACNA1A-238	ENST00000637276	VWCE	Q96DN2	955 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	COL18A1	P39060	1754 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	TRAV4	A0A0B4J268	109 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	RHOD	O00212	210 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	C20orf204	Q6ZNR8	217 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	LINC00473	A8K010	186 aa		13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	SLC25A48	Q6ZT89	311 aa	Known RBP	13.14	□□□□□ -0.31
CACNA1A-238	ENST00000637276	UBE2C	O00762	179 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	CACNA1H	O95180	2353 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	MUC4	Q99102	2169 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	NDUFB8	O95169	186 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	GYPE	P15421	78 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	C3orf79	P0CE67	100 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	HOXB4	P17483	251 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	KLHDC3	Q9BQ90	382 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	ARHGAP21	Q5T5U3	1957 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	CDKN1B	P46527	198 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	HS3ST6	Q96QI5	342 aa		13.13	□□□□□ -0.31
CACNA1A-238	ENST00000637276	FOXI1	Q12951	378 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	USMG5	Q96IX5	58 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	BRCA1	P38398	1863 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	FAM231B	A6NCW3	169 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	IFITM1	P13164	125 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	CD59	P13987	128 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	LYPD6	Q86Y78	171 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	COL4A5	P29400	1685 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	MRPL23	Q16540	153 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	CCL18	P55774	89 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	IGKV1-6	A0A0C4DH72	117 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	CCL24	O00175	119 aa		13.12	□□□□□ -0.31
CACNA1A-238	ENST00000637276	MST1	P26927	711 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	C9orf139	Q6ZV77	190 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	SYS1-DBNDD2	H3BUS1	97 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	LMO1	P25800	156 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	TMEM75	Q8N9X5	138 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	LINC00271	P0C7V0	271 aa		13.11	□□□□□ -0.31
CACNA1A-238	ENST00000637276	SBF2	Q86WG5	1849 aa		13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	LINC00114	Q6XXX2	140 aa		13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	TRAV13-2	A0A0B4J235	113 aa		13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	SRSF2	Q01130	221 aa	Known RBP	13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	ORMDL1	Q9P0S3	153 aa		13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	NDUFA12	Q9UI09	145 aa		13.1	□□□□□ -0.31
CACNA1A-238	ENST00000637276	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNA1A-238	ENST00000637276	IGHV1-24	A0A0C4DH33	117 aa		13.09	□□□□□ -0.31
CACNA1A-238	ENST00000637276	EML6	Q6ZMW3	1958 aa		13.09	□□□□□ -0.31
CACNA1A-238	ENST00000637276	NDUFB1	O75438	58 aa		13.09	□□□□□ -0.31
CACNA1A-238	ENST00000637276	GGN	Q86UU5	652 aa		13.09	□□□□□ -0.31
CACNA1A-238	ENST00000637276	WDR81	Q562E7	1941 aa		13.08	□□□□□ -0.31
CACNA1A-238	ENST00000637276	FAM231D	Q6ZW35	169 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	LINC01551	Q86U37	167 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGF2-AS	Q6U949	168 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	TPSG1	Q9NRR2	321 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	SDHAF1	A6NFY7	115 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	ETV2	O00321	342 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	HIGD2B	Q4VC39	106 aa		13.08	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGHV1-69D	A0A0B4J2H0	117 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGHV1-69	P01742	117 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGLV2-18	A0A075B6J9	118 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	NDUFS7	O75251	213 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	MINOS1	Q5TGZ0	78 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	BRK1	Q8WUW1	75 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	MINOS1-NBL1	R4GNA1	71 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	RETNLB	Q9BQ08	111 aa		13.07	□□□□□ -0.32
CACNA1A-238	ENST00000637276	C2orf66	Q6UXQ4	117 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	WDR83OS	Q9Y284	106 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	UTF1	Q5T230	341 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	BAALC-AS2	P0C853	105 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276		A0A0G2JRQ6	117 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276		H3BMG7	143 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	DEFB135	Q30KP9	77 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	TRGV9	Q99603	122 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	DIAPH2-AS1	Q14236	149 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	ANKRD29	Q8N6D5	301 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276		Q9H8V8	135 aa		13.06	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IL18BP	O95998	194 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	ZNF883	P0CG24	379 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	GP9	P14770	177 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	FAM110A	Q9BQ89	295 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276		X6R8D5	127 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	GREB1L	Q9C091	1923 aa	Predicted RBP	13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGKV1D-17	A0A075B6S4	117 aa		13.05	□□□□□ -0.32
CACNA1A-238	ENST00000637276	SPINK6	Q6UWN8	80 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	COLCA2	A8K830	154 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	DEFB112	Q30KQ8	113 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	C17orf77	Q96MU5	243 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	REG4	Q9BYZ8	158 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	LECT2	O14960	151 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	CYYR1	Q96J86	154 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	LCT	P09848	1927 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	DLEU1	O43261	78 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	HIST2H2BC	Q6DN03	193 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	VSIG2	Q96IQ7	327 aa		13.04	□□□□□ -0.32
CACNA1A-238	ENST00000637276	SRRM5	B3KS81	715 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	ZNF664	Q8N3J9	261 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	CYTL1	Q9NRR1	136 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	SMPX	Q9UHP9	88 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	BRWD3	Q6RI45	1802 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276		A0A1B0GX51	115 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms