RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
CLN5-208ENST00000636183 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
CLN5-208ENST00000636183 C2orf66Q6UXQ4 117 aa12.76□□□□□ -0.37
CLN5-208ENST00000636183 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
CLN5-208ENST00000636183 PRR25Q96S07 402 aa12.76□□□□□ -0.37
CLN5-208ENST00000636183 CARHSP1Q9Y2V2 147 aaKnown RBP12.76□□□□□ -0.37
CLN5-208ENST00000636183 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
CLN5-208ENST00000636183 PLCE1Q9P212 2302 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 TMEM190Q8WZ59 177 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 TP53BP1Q12888 1972 aaPredicted RBP12.75□□□□□ -0.37
CLN5-208ENST00000636183 NOTCH3Q9UM47 2321 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 IGKV2-24A0A0C4DH68 120 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 TMEM14EPQ6UXP3 125 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 LCTP09848 1927 aa12.75□□□□□ -0.37
CLN5-208ENST00000636183 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 WT1P19544 449 aaPredicted RBP12.74□□□□□ -0.37
CLN5-208ENST00000636183 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 BOD1L2Q8IYS8 172 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 ATRXP46100 2492 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
CLN5-208ENST00000636183 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
CLN5-208ENST00000636183 PHF3Q92576 2039 aaKnown RBP12.74□□□□□ -0.37
CLN5-208ENST00000636183 GNRH2O43555 120 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 IGHG4P01861 327 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 BAALCQ8WXS3 180 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 AMTNQ6UX39 209 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 LY6G6FQ5SQ64 297 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 BLCAPP62952 87 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 FOXE3Q13461 319 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 SEM1Q6ZVN7 128 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 LINC01551Q86U37 167 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 C16orf74Q96GX8 76 aa12.73□□□□□ -0.37
CLN5-208ENST00000636183 LTBP1Q14766 1721 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 ATP6V0E2Q8NHE4 81 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 ROS1P08922 2347 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 M0R2N4 97 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 CFHR4Q92496 578 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 UBL5Q9BZL1 73 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 LY6G6CO95867 125 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 MPZP25189 248 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 HERVK_113P63121 156 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
CLN5-208ENST00000636183 SPRY2O43597 315 aa12.71□□□□□ -0.37
CLN5-208ENST00000636183 STPG4Q8N801 248 aa12.71□□□□□ -0.37
CLN5-208ENST00000636183 C11orf45Q8TAV5 145 aa12.71□□□□□ -0.37
CLN5-208ENST00000636183 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
CLN5-208ENST00000636183 DYSFO75923 2080 aa12.71□□□□□ -0.38
CLN5-208ENST00000636183 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.38
CLN5-208ENST00000636183 C5orf47Q569G3 176 aa12.71□□□□□ -0.38
CLN5-208ENST00000636183 Q6ZWC4 215 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
CLN5-208ENST00000636183 HLA-DMBP28068 263 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 MRPL36Q9P0J6 103 aaKnown RBP12.7□□□□□ -0.38
CLN5-208ENST00000636183 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 J3QRE1 110 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
CLN5-208ENST00000636183 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
CLN5-208ENST00000636183 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 SLX1AQ9BQ83 275 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 NBASA2RRP1 2371 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 H3BRN7 92 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 PROP1O75360 226 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 NDUFB1O75438 58 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 A0A087WW49 117 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 IGHV2-70P01814 119 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 H3BUA1 57 aa12.69□□□□□ -0.38
CLN5-208ENST00000636183 DOCK9Q9BZ29 2069 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
CLN5-208ENST00000636183 WDR86Q86TI4 376 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 RS1O15537 224 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 Q6ZRM9 215 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 C10orf105Q8TEF2 133 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
CLN5-208ENST00000636183 CXCL1P09341 107 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 BTCP35070 178 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 ATRAIDQ6UW56 229 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 LHFPL1Q86WI0 220 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 Q8N8P6 123 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 TRACP01848 142 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 ASPHD1Q5U4P2 390 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 PROK2Q9HC23 129 aa12.67□□□□□ -0.38
CLN5-208ENST00000636183 COX7A2LO14548 114 aa12.66□□□□□ -0.38
CLN5-208ENST00000636183 HIST1H2BKO60814 126 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms