RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FAM25EA8MYX2 175 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 PLA2G10O15496 165 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 NDUFB4O95168 129 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 PDE6HQ13956 83 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-228ENST00000629725 OR10G4Q8NGN3 311 aa13.44□□□□□ -0.26
TARDBP-228ENST00000629725 IBA57-AS1B1ANH7 110 aa13.43□□□□□ -0.26
TARDBP-228ENST00000629725 LYRM1O43325 122 aa13.43□□□□□ -0.26
TARDBP-228ENST00000629725 HIST1H1EP10412 219 aaKnown RBP13.43□□□□□ -0.26
TARDBP-228ENST00000629725 BCAP31P51572 246 aa13.43□□□□□ -0.26
TARDBP-228ENST00000629725 Q9HAA7 133 aa13.43□□□□□ -0.26
TARDBP-228ENST00000629725 TRAV6A0A075B6T7 132 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 IGKV2-40A0A087WW87 121 aaPredicted RBP13.42□□□□□ -0.26
TARDBP-228ENST00000629725 CST7O76096 145 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 IGKV2D-40P01614 121 aaPredicted RBP13.42□□□□□ -0.26
TARDBP-228ENST00000629725 TCRBP04435 133 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 CAV2P51636 162 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 LINC01556Q5JQF7 62 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 Q6ZSA8 131 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 BLNKQ8WV28 456 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 RASL10AQ92737 203 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 AAMDCQ9H7C9 122 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 TMEM14CQ9P0S9 112 aa13.42□□□□□ -0.26
TARDBP-228ENST00000629725 FAT3Q8TDW7 4589 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 C5orf51A6NDU8 294 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 SEC22CQ9BRL7 303 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 SLC25A31Q9H0C2 315 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 ZNF492Q9P255 531 aa13.41□□□□□ -0.26
TARDBP-228ENST00000629725 FAM24AA6NFZ4 105 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 PYYP10082 97 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 FAM122CQ6P4D5 195 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 PLA2G2DQ9UNK4 145 aa13.4□□□□□ -0.26
TARDBP-228ENST00000629725 RPL29P47914 159 aaKnown RBP13.39□□□□□ -0.27
TARDBP-228ENST00000629725 PPT1P50897 306 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 NHLRC2Q8NBF2 726 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 SPXQ9BT56 116 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 UQCC1Q9NVA1 299 aa13.39□□□□□ -0.27
TARDBP-228ENST00000629725 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
TARDBP-228ENST00000629725 TIRAPP58753 221 aa13.38□□□□□ -0.27
TARDBP-228ENST00000629725 C2orf50Q96LR7 162 aa13.38□□□□□ -0.27
TARDBP-228ENST00000629725 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
TARDBP-228ENST00000629725 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 UBE2L5PA0A1B0GUS4 154 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 PVALBP20472 110 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-228ENST00000629725 ZNF138P52744 262 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 S100A10P60903 97 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 OR4C5Q8NGB2 326 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 Q8TAT8 98 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
TARDBP-228ENST00000629725 TRAV8-6A0A0B4J262 113 aa13.36□□□□□ -0.27
TARDBP-228ENST00000629725 TRBV7-9A0A0J9YWB2 115 aa13.36□□□□□ -0.27
TARDBP-228ENST00000629725 SULT1A1P50225 295 aa13.36□□□□□ -0.27
TARDBP-228ENST00000629725 BAXQ07812 192 aa13.36□□□□□ -0.27
TARDBP-228ENST00000629725 VWC2Q2TAL6 325 aa13.36□□□□□ -0.27
TARDBP-228ENST00000629725 GPN1Q9HCN4 374 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-228ENST00000629725 LYRM2Q9NU23 88 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-228ENST00000629725 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 OXTP01178 125 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 H2AFB2P0C5Z0 115 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 TMEM183BQ1AE95 376 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 OR10J3Q5JRS4 329 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 TMEM183AQ8IXX5 376 aa13.35□□□□□ -0.27
TARDBP-228ENST00000629725 TRGV11A0A075B6L2 103 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 IGHV3-30P01768 117 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 IGHV3-33P01772 117 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 IGHV3-30-3P0DP02 117 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 IGHV3-30-5P0DP03 117 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 S100A11P31949 105 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 RAB32Q13637 225 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 ZNF266Q14584 549 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 FAM159AQ6UWV7 190 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 STX12Q86Y82 276 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 TM2D2Q9BX73 214 aa13.34□□□□□ -0.27
TARDBP-228ENST00000629725 FGF7P21781 194 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 HBG1P69891 147 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 HBG2P69892 147 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 IL15RAQ13261 267 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 WFDC2Q14508 124 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 SLC25A2Q9BXI2 301 aa13.33□□□□□ -0.28
TARDBP-228ENST00000629725 PFN1P07737 140 aaKnown RBP13.32□□□□□ -0.28
TARDBP-228ENST00000629725 NBEAP1P0C6P0 100 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 LAGE3Q14657 143 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 NDUFA13Q9P0J0 144 aa13.32□□□□□ -0.28
TARDBP-228ENST00000629725 IGHV3-16A0A0C4DH30 117 aa13.31□□□□□ -0.28
TARDBP-228ENST00000629725 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
TARDBP-228ENST00000629725 M0R2P5 195 aa13.31□□□□□ -0.28
TARDBP-228ENST00000629725 GATA1P15976 413 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-228ENST00000629725 TDRG1Q3Y452 100 aa13.31□□□□□ -0.28
TARDBP-228ENST00000629725 Q6AWC8 147 aa13.31□□□□□ -0.28
TARDBP-228ENST00000629725 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms