RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ZNF418Q8TF45 676 aaPredicted RBP10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 C20orf144Q9BQM9 153 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 EREGO14944 169 aa10.27□□□□□ -0.76
PPP4R3B-206ENST00000616407 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 LINC01548A6NM66 108 aa10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 TNFRSF18Q9Y5U5 241 aa10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 NUTF2P61970 127 aaKnown RBP10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 LAGE3Q14657 143 aa10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 RRN3P1Q2M238 152 aa10.27□□□□□ -0.77
PPP4R3B-206ENST00000616407 H7C1H1 209 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGLC2P0DOY2 106 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 RPL24P83731 157 aaKnown RBP10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 ORMDL2Q53FV1 153 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 OR2K2Q8NGT1 345 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 TMEM158Q8WZ71 300 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 VCANP13611 3396 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 DPM2O94777 84 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 F6UB75 175 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 KLHL30-AS1Q8NEE0 82 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 MS4A6AQ9H2W1 248 aa10.26□□□□□ -0.77
PPP4R3B-206ENST00000616407 CFAP54Q96N23 3096 aa10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 PF4P02776 101 aa10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 LINC00322Q6ZN03 302 aaPredicted RBP10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
PPP4R3B-206ENST00000616407 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 J3QLI3 93 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 J3QR89 54 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 SIGLEC8Q9NYZ4 499 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 CYSLTR1Q9Y271 337 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGHV7-4-1A0A0J9YVY3 117 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 NPYP01303 97 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 A0A087WWL8 130 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGKCP01834 107 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 STHQ8IWL8 128 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 FOXE3Q13461 319 aa10.24□□□□□ -0.77
PPP4R3B-206ENST00000616407 DEFB131AP59861 70 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 ANXA2RQ3ZCQ2 193 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 CBY1Q9Y3M2 126 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 FABP2P12104 132 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 PSMB2P49721 201 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 BCL6BQ8N143 479 aaPredicted RBP10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 LRRK2Q5S007 2527 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 KLF5Q13887 457 aaPredicted RBP10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 MPV17L2Q567V2 206 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 TEX43Q6ZNM6 134 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 STPG4Q8N801 248 aa10.23□□□□□ -0.77
PPP4R3B-206ENST00000616407 TRGV11A0A075B6L2 103 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 A0A087X0K7 114 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 H3BUA1 57 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGLL1P15814 213 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 PRSS2P07478 247 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 AMMECR1LQ6DCA0 310 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 SPRY2O43597 315 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 SORL1Q92673 2214 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 VPS13AQ96RL7 3174 aa10.22□□□□□ -0.77
PPP4R3B-206ENST00000616407 MAJINQ3KP22 176 aa10.21□□□□□ -0.77
PPP4R3B-206ENST00000616407 JMJD8Q96S16 334 aa10.21□□□□□ -0.77
PPP4R3B-206ENST00000616407 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.77
PPP4R3B-206ENST00000616407 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.77
PPP4R3B-206ENST00000616407 CSTL1Q9H114 145 aa10.21□□□□□ -0.77
PPP4R3B-206ENST00000616407 TRAV12-2A0A075B6T6 113 aa10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 TMEM238LA0A1B0GVL6 79 aa10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 A6NJY4 79 aa10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 MLST8Q9BVC4 326 aa10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 SMIM13P0DJ93 91 aa10.21□□□□□ -0.78
PPP4R3B-206ENST00000616407 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 EBI3Q14213 229 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 VPREB3Q9UKI3 123 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 GEMIN7Q9H840 131 aaKnown RBP10.2□□□□□ -0.78
PPP4R3B-206ENST00000616407 TRBV12-3P01733 135 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 SPOCK3Q9BQ16 436 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 A0A1W2PPR1 153 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 H7C2G1 150 aa10.19□□□□□ -0.78
PPP4R3B-206ENST00000616407 LYRM7Q5U5X0 104 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms