RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
MDC1-209ENST00000613547 PRNTQ86SH4 94 aa9.57□□□□□ -0.88
MDC1-209ENST00000613547 MUC7Q8TAX7 377 aa9.57□□□□□ -0.88
MDC1-209ENST00000613547 AKR1C3P42330 323 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 CCL20P78556 96 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 PMS2P11Q13670 270 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 C11orf45Q8TAV5 145 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 FMC1Q96HJ9 113 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 SGK494Q96LW2 274 aa9.56□□□□□ -0.88
MDC1-209ENST00000613547 HUWE1Q7Z6Z7 4374 aaKnown RBP9.55□□□□□ -0.88
MDC1-209ENST00000613547 CXorf65A6NEN9 183 aa9.55□□□□□ -0.88
MDC1-209ENST00000613547 RGS13O14921 159 aa9.55□□□□□ -0.88
MDC1-209ENST00000613547 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
MDC1-209ENST00000613547 TMEM263Q8WUH6 116 aaKnown RBP9.55□□□□□ -0.88
MDC1-209ENST00000613547 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
MDC1-209ENST00000613547 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
MDC1-209ENST00000613547 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 ZNF324O75467 553 aaPredicted RBP9.54□□□□□ -0.88
MDC1-209ENST00000613547 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 SPART-AS1P0CW21 52 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 BCL2P10415 239 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
MDC1-209ENST00000613547 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 PRR9Q5T870 116 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 Q6AWC8 147 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 TEX261Q6UWH6 196 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 Q86TA4 180 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 LINC00479Q96M42 142 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
MDC1-209ENST00000613547 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 SCO2A0A1W2PP80 73 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 CBY3A6NI87 242 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 PDE6DO43924 150 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 TMEM183BQ1AE95 376 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
MDC1-209ENST00000613547 TVP23CQ96ET8 276 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 VAX2Q9UIW0 290 aa9.53□□□□□ -0.88
MDC1-209ENST00000613547 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
MDC1-209ENST00000613547 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
MDC1-209ENST00000613547 SNURFLB1AK76 121 aa9.52□□□□□ -0.89
MDC1-209ENST00000613547 AZU1P20160 251 aa9.52□□□□□ -0.89
MDC1-209ENST00000613547 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.89
MDC1-209ENST00000613547 RNASE8Q8TDE3 154 aaKnown RBP9.52□□□□□ -0.89
MDC1-209ENST00000613547 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
MDC1-209ENST00000613547 GCGP01275 180 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
MDC1-209ENST00000613547 ANXA2RQ3ZCQ2 193 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 MUC21Q5SSG8 566 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 C2CD4CQ8TF44 421 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 C11orf52Q96A22 123 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 KCNS1Q96KK3 526 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 C8orf49Q96NF6 230 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 DKK2Q9UBU2 259 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 NAGKQ9UJ70 344 aa9.51□□□□□ -0.89
MDC1-209ENST00000613547 TRGV11A0A075B6L2 103 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 NUPR2A6NF83 97 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 LTAP01374 205 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 PRM2P04554 102 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 PFN1P07737 140 aaKnown RBP9.5□□□□□ -0.89
MDC1-209ENST00000613547 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
MDC1-209ENST00000613547 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
MDC1-209ENST00000613547 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 DAD1P61803 113 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 TDRG1Q3Y452 100 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
MDC1-209ENST00000613547 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
MDC1-209ENST00000613547 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
MDC1-209ENST00000613547 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
MDC1-209ENST00000613547 RAB14P61106 215 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 Q6ZQT7 251 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 TMEM183AQ8IXX5 376 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
MDC1-209ENST00000613547 GSN-AS1Q9NRJ2 163 aa9.48□□□□□ -0.89
MDC1-209ENST00000613547 KLK5Q9Y337 293 aaPredicted RBP9.48□□□□□ -0.89
MDC1-209ENST00000613547 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 DEFB130BP0DP73 79 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 DEFB130AP0DP74 79 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
MDC1-209ENST00000613547 TCL1AP56279 114 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
MDC1-209ENST00000613547 C12orf74Q32Q52 190 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 ZNF506Q5JVG8 444 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 FAM162BQ5T6X4 162 aa9.47□□□□□ -0.89
MDC1-209ENST00000613547 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms