RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
SSX3-204ENST00000612497 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
SSX3-204ENST00000612497 NPVFQ9HCQ7 196 aa6.6□□□□□ -1.35
SSX3-204ENST00000612497 EXTL2Q9UBQ6 330 aa6.6□□□□□ -1.35
SSX3-204ENST00000612497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
SSX3-204ENST00000612497 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
SSX3-204ENST00000612497 DUXBA0A1W2PPF3 345 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 ZNF253O75346 499 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
SSX3-204ENST00000612497 HIST1H1EP10412 219 aaKnown RBP6.59□□□□□ -1.35
SSX3-204ENST00000612497 SLC25A6P12236 298 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 CLVS1Q8IUQ0 354 aaPredicted RBP6.59□□□□□ -1.35
SSX3-204ENST00000612497 RAB2BQ8WUD1 216 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 SCGB3A2Q96PL1 93 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.35
SSX3-204ENST00000612497 PRELID1Q9Y255 219 aa6.59□□□□□ -1.35
SSX3-204ENST00000612497 TRGV11A0A075B6L2 103 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 FBLL1A6NHQ2 334 aaKnown RBP6.58□□□□□ -1.36
SSX3-204ENST00000612497 M0R2P5 195 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 OR10J4P0C629 311 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 AKAIN1P0CW23 69 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 UBE2MP61081 183 aaKnown RBP6.58□□□□□ -1.36
SSX3-204ENST00000612497 SSBP1Q04837 148 aaKnown RBP6.58□□□□□ -1.36
SSX3-204ENST00000612497 RHOHQ15669 191 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 BAK1Q16611 211 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 MZT2AQ6P582 158 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 PSENENQ9NZ42 101 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 ZNF492Q9P255 531 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 MGAT4CQ9UBM8 478 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 TIMM9Q9Y5J7 89 aa6.58□□□□□ -1.36
SSX3-204ENST00000612497 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 A0A0U1RQV1 116 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 PANO1I0J062 215 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
SSX3-204ENST00000612497 RAB31Q13636 194 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 EXOC3-AS1Q8N2X6 119 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 AP3S1Q92572 193 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 SH3BGRL3Q9H299 93 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 OR51M1Q9H341 326 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 RABL2BQ9UNT1 228 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 URGCP-MRPS24S4R325 110 aa6.57□□□□□ -1.36
SSX3-204ENST00000612497 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 FNDC10F2Z333 226 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 NDUFB4O95168 129 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 SEC11BP0C7V7 166 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 METTL15P1P0C7V9 234 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 ZNF138P52744 262 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 NCS1P62166 190 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 MRPS10P82664 201 aaKnown RBP6.56□□□□□ -1.36
SSX3-204ENST00000612497 Q8TAT8 98 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 ZC2HC1AQ96GY0 325 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 AAMDCQ9H7C9 122 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 RABL2AQ9UBK7 228 aaPredicted RBP6.56□□□□□ -1.36
SSX3-204ENST00000612497 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 MUC2Q02817 5179 aa6.56□□□□□ -1.36
SSX3-204ENST00000612497 HOXB5P09067 269 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 ZNF266Q14584 549 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 Q6ZRG5 221 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 MGST2Q99735 147 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 MCUBQ9NWR8 336 aa6.55□□□□□ -1.36
SSX3-204ENST00000612497 GNRH2O43555 120 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 SSSCA1O60232 199 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 VAMP1P23763 118 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 KRTAP10-8P60410 259 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 VBP1P61758 197 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
SSX3-204ENST00000612497 A0A087WWC5 75 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 TRBV7-9A0A0J9YWB2 115 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 ID3Q02535 119 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 PDE6HQ13956 83 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 WDR73Q6P4I2 378 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 TMEM14EPQ6UXP3 125 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 NIT1Q86X76 327 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 C12orf45Q8N5I9 185 aaPredicted RBP6.53□□□□□ -1.36
SSX3-204ENST00000612497 OR1L4Q8NGR5 311 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 SMIM4Q8WVI0 70 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 SMIM8Q96KF7 97 aa6.53□□□□□ -1.36
SSX3-204ENST00000612497 GPN1Q9HCN4 374 aaPredicted RBP6.53□□□□□ -1.36
SSX3-204ENST00000612497 GAGE12JA6NER3 117 aa6.52□□□□□ -1.37
SSX3-204ENST00000612497 PHOX2AO14813 284 aa6.52□□□□□ -1.37
SSX3-204ENST00000612497 CIDEAO60543 219 aa6.52□□□□□ -1.37
SSX3-204ENST00000612497 PRSS1P07477 247 aa6.52□□□□□ -1.37
SSX3-204ENST00000612497 PYYP10082 97 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms