RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
SSBP1-215ENST00000612337 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
SSBP1-215ENST00000612337 PAX4O43316 350 aa12.19□□□□□ -0.46
SSBP1-215ENST00000612337 SSNA1O43805 119 aa12.19□□□□□ -0.46
SSBP1-215ENST00000612337 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
SSBP1-215ENST00000612337 PPP1R1CQ8WVI7 109 aa12.19□□□□□ -0.46
SSBP1-215ENST00000612337 MRPL32Q9BYC8 188 aaKnown RBP12.19□□□□□ -0.46
SSBP1-215ENST00000612337 FAT1Q14517 4588 aa12.19□□□□□ -0.46
SSBP1-215ENST00000612337 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 IGHV3-53P01767 116 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 ZNF138P52744 262 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 SLAQ13239 276 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 Q6ZQT7 251 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 KCNIP2Q9NS61 270 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 MRPL16Q9NX20 251 aaKnown RBP12.18□□□□□ -0.46
SSBP1-215ENST00000612337 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
SSBP1-215ENST00000612337 NXPH4O95158 308 aa12.17□□□□□ -0.46
SSBP1-215ENST00000612337 OR10J4P0C629 311 aa12.17□□□□□ -0.46
SSBP1-215ENST00000612337 PHYHIPLQ96FC7 376 aa12.17□□□□□ -0.46
SSBP1-215ENST00000612337 WDR61Q9GZS3 305 aaKnown RBP12.17□□□□□ -0.46
SSBP1-215ENST00000612337 MPC2O95563 127 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 CRYBA4P53673 196 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 FHL2Q14192 279 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 Q8TAT8 98 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 HHLA3Q9XRX5 114 aa12.16□□□□□ -0.46
SSBP1-215ENST00000612337 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
SSBP1-215ENST00000612337 CSN1S1P47710 185 aa12.15□□□□□ -0.46
SSBP1-215ENST00000612337 HERC1Q15751 4861 aa12.15□□□□□ -0.47
SSBP1-215ENST00000612337 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 OR7C2O60412 319 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 PET100P0DJ07 73 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 ZNF266Q14584 549 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
SSBP1-215ENST00000612337 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
SSBP1-215ENST00000612337 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
SSBP1-215ENST00000612337 ATP5SQ99766 215 aa12.13□□□□□ -0.47
SSBP1-215ENST00000612337 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
SSBP1-215ENST00000612337 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
SSBP1-215ENST00000612337 UBE2L3P68036 154 aaKnown RBP12.12□□□□□ -0.47
SSBP1-215ENST00000612337 MUC21Q5SSG8 566 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 Q6AWC8 147 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 IQCF2Q8IXL9 164 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 LENEPQ9Y5L5 61 aa12.12□□□□□ -0.47
SSBP1-215ENST00000612337 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 EREGO14944 169 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 SPXQ9BT56 116 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
SSBP1-215ENST00000612337 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 KHDC3LQ587J8 217 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 FFAR4Q5NUL3 377 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 OR10G4Q8NGN3 311 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 RASL10AQ92737 203 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
SSBP1-215ENST00000612337 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TRAV9-2A0A087WT02 112 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 K7EQD1 137 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 PTTG1O95997 202 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 IFNA5P01569 189 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 SFTA3P0C7M3 94 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 SRIP30626 198 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TAS2R45P59539 299 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TMEM183BQ1AE95 376 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 SCGB1C1Q8TD33 95 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
SSBP1-215ENST00000612337 K7EP13 123 aa12.08□□□□□ -0.48
SSBP1-215ENST00000612337 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
SSBP1-215ENST00000612337 WFDC1Q9HC57 220 aa12.08□□□□□ -0.48
SSBP1-215ENST00000612337 ORM1P02763 201 aa12.07□□□□□ -0.48
SSBP1-215ENST00000612337 GYPEP15421 78 aa12.07□□□□□ -0.48
SSBP1-215ENST00000612337 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
SSBP1-215ENST00000612337 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
SSBP1-215ENST00000612337 OTORQ9NRC9 128 aa12.07□□□□□ -0.48
SSBP1-215ENST00000612337 DNAH8Q96JB1 4490 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 A0A087WTM6 91 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 EVI2AP22794 236 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.485e-7■□□□□ 8.7
SSBP1-215ENST00000612337 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
SSBP1-215ENST00000612337 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms