RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TLN2Q9Y4G6 2542 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 SETD2Q9BYW2 2564 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 TET2Q6N021 2002 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 INS-IGF2F8WCM5 200 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 Q71RC1 249 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 SRSF8Q9BRL6 282 aaKnown RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 MRPL16Q9NX20 251 aaKnown RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 MGAQ8IWI9 3026 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 TMEM8BA6NDV4 472 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 K7EMI3 77 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 PRSS2P07478 247 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 LAGE3Q14657 143 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 PRSS22Q9GZN4 317 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 C7orf69Q9H7B7 122 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 TRAV41A0A0B4J266 112 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 A0A1B0GWB2 263 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 ID1P41134 155 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 KIR2DL4Q99706 377 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 CYSLTR1Q9Y271 337 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 BSNQ9UPA5 3926 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 CCDC168Q8NDH2 2452 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 PRAC2D3DTV9 90 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 CD7P09564 240 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 EFNA4P52798 201 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 MINOS1Q5TGZ0 78 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 DEFB125Q8N687 156 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 Q8N976 141 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 MINOS1-NBL1R4GNA1 71 aa5.38□□□□□ -1.55
SYNPO2-206ENST00000610556 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 ASPMQ8IZT6 3477 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 K7ENP7 123 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 K7ERJ3 54 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 SPATA12Q7Z6I5 190 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 DTX2Q86UW9 622 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 Q8NA96 180 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF479Q96JC4 524 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 CHAC1Q9BUX1 264 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 COL27A1Q8IZC6 1860 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 TRAV21A0A0B4J279 112 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 IGHV2-70DA0A0C4DH43 119 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 CIDEAO60543 219 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 USP9XQ93008 2570 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 PIEZO1Q92508 2521 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 A6NJY4 79 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 TAX1BP3O14907 124 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 CTSGP08311 255 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 LGALS9BQ3B8N2 356 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 LGALS9CQ6DKI2 356 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 AGPAT4-IT1Q9H0P7 198 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 SCRT2Q9NQ03 307 aa5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 BEX4Q9NWD9 120 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 MRPL35Q9NZE8 188 aaKnown RBP5.37□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF815PA8K554 130 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 NPFFO15130 113 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 FOXE3Q13461 319 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 C8orf86Q6ZUL3 223 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 NEGR1Q7Z3B1 354 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 DPF1Q92782 380 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 IGLV11-55A0A075B6I3 123 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 IGHV3-64A0A075B6Q5 118 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 OOSP1A8MZH6 123 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 MYCNOSP40205 109 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 CFHR4Q92496 578 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 PIMREGQ9BSJ6 248 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 NPFFR1Q9GZQ6 430 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 FREM2Q5SZK8 3169 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 IGHV7-81A0A0B4J1V7 117 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 H3BUX3 64 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 DEFB1P60022 68 aa5.36□□□□□ -1.55
SYNPO2-206ENST00000610556 IGHV3OR16-12A0A075B7B8 117 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 A0A087WWL8 130 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 SAP30O75446 220 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 FCN3O75636 299 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF688P0C7X2 276 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 CRIP1P50238 77 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF80P51504 273 aaPredicted RBP5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 F6UB75 175 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 TCF15Q12870 199 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 OR11H6Q8NGC7 330 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 FAM110DQ8TAY7 271 aaPredicted RBP5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 PCSK5Q92824 1860 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 TRAV12-3A0A0B4J271 114 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 H3BRM9 83 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 K7EP13 123 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 ORMDL2Q53FV1 153 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 OR5A1Q8NGJ0 315 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 CCL19Q99731 98 aa5.35□□□□□ -1.55
SYNPO2-206ENST00000610556 MOB4Q9Y3A3 225 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms