RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ITLN2Q8WWU7 325 aaPredicted RBP8.17□□□□□ -1.1
CTCFL-216ENST00000608263 F8P00451 2351 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 ESDP10768 282 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 C2orf70A6NJV1 201 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 CDKN1BP46527 198 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 TTC9CQ8N5M4 171 aa8.17□□□□□ -1.1
CTCFL-216ENST00000608263 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
CTCFL-216ENST00000608263 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 CD5LO43866 347 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 IGKCP01834 107 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 LINC00311Q8N616 119 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
CTCFL-216ENST00000608263 ANKRD17O75179 2603 aaKnown RBP8.16□□□□□ -1.1
CTCFL-216ENST00000608263 CT83Q5H943 113 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 WIPF2Q8TF74 440 aaPredicted RBP8.16□□□□□ -1.1
CTCFL-216ENST00000608263 PRR25Q96S07 402 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
CTCFL-216ENST00000608263 VWC2LB2RUY7 222 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
CTCFL-216ENST00000608263 DPM2O94777 84 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 EGR2P11161 476 aaPredicted RBP8.15□□□□□ -1.1
CTCFL-216ENST00000608263 SEC11AP67812 179 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 SAMD5Q5TGI4 173 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 K7EIM0 57 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 PRSS2P07478 247 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 HSD52Q0P140 79 aa8.15□□□□□ -1.1
CTCFL-216ENST00000608263 KLF5Q13887 457 aaPredicted RBP8.15□□□□□ -1.1
CTCFL-216ENST00000608263 H3BRN7 92 aa8.15□□□□□ -1.11
CTCFL-216ENST00000608263 ID1P41134 155 aa8.15□□□□□ -1.11
CTCFL-216ENST00000608263 CD300EQ496F6 205 aaPredicted RBP8.15□□□□□ -1.11
CTCFL-216ENST00000608263 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.11
CTCFL-216ENST00000608263 CYSLTR1Q9Y271 337 aa8.15□□□□□ -1.11
CTCFL-216ENST00000608263 IGHV4-61A0A0C4DH41 118 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 ATP5LO75964 103 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 MBD6Q96DN6 1003 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 IGHV4-30-2A0A087WSY4 118 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 C19orf84I3L1E1 186 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 K7ERJ3 54 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 PRTN3P24158 256 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF562Q6V9R5 426 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 SIGLEC15Q6ZMC9 328 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
CTCFL-216ENST00000608263 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
CTCFL-216ENST00000608263 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 ATP6V0E1O15342 81 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 COX8AP10176 69 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 LINC01356Q8N9X3 169 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF292O60281 2723 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 MGAM2Q2M2H8 2515 aa8.14□□□□□ -1.11
CTCFL-216ENST00000608263 IGHV3-64A0A075B6Q5 118 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 I3L2K1 104 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 DSCR9P59020 149 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF56Q15929 161 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 HERVK_113P61574 105 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 C3orf36Q3SXR2 165 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 BOD1L1Q8NFC6 3051 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 CIDEAO60543 219 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 SLC25A16P16260 332 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 CTRLP40313 264 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 ASIPP42127 132 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 DGAT2L7PQ6IED9 249 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 SPATA12Q7Z6I5 190 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 SAP30O75446 220 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 NEGR1Q7Z3B1 354 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
CTCFL-216ENST00000608263 PPBPP02775 128 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 HTN3P15516 51 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 RAB9AP51151 201 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 DYNAPQ8N1N2 210 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 DEFB1P60022 68 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
CTCFL-216ENST00000608263 TEP1Q99973 2627 aaKnown RBP8.11□□□□□ -1.11
CTCFL-216ENST00000608263 PSMB11A5LHX3 300 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 TAX1BP3O14907 124 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 RBX1P62877 108 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 PAX8Q06710 450 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 OR9G4Q8NGQ1 327 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 KAAG1Q9UBP8 84 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 KLF12Q9Y4X4 402 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 SETXQ7Z333 2677 aaKnown RBP8.11□□□□□ -1.11
CTCFL-216ENST00000608263 PRAC2D3DTV9 90 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 IGLV1-47P01700 117 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 IGHV4-39P01824 125 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 CD7P09564 240 aa8.11□□□□□ -1.11
CTCFL-216ENST00000608263 SRSF1Q07955 248 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTCFL-216ENST00000608263 RNF5Q99942 180 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms