RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 KLLNB2CW77 178 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 PHOX2AO14813 284 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 S100A8P05109 93 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 LEPP41159 167 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 C11orf44Q8N8P7 122 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TRAV21A0A0B4J279 112 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 ZNF688P0C7X2 276 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TSPOP30536 169 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 INSL3P51460 131 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 KRTAP10-3P60369 221 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 PSMG4Q5JS54 123 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 IGKV3-7A0A075B6H7 116 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 CA1P00915 261 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 IGLV1-51P01701 117 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 HLA-DRB4P13762 266 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 CTRLP40313 264 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 ZNF80P51504 273 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 CNFNQ9BYD5 112 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 HLA-DRB4X5D2U9 266 aa9.17□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 F2Z2F3 143 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 PF4P02776 101 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TRGC2P03986 189 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 HBBP68871 147 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 NSUN5P1Q3KNT7 163 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 DNLZQ5SXM8 178 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 BORCS7Q96B45 105 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TRAPPC1Q9Y5R8 145 aa9.16□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 A0A1B0GUT8 65 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 GPX1P07203 203 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TFPI2P48307 235 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TCL1AP56279 114 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 RIGQ13278 110 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.94
NEDD8-MDP1-203ENST00000604306 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 F6UB75 175 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SAP30O75446 220 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 AMBPP02760 352 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 CDKN1BP46527 198 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 TDRG1Q3Y452 100 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 AGRNO00468 2067 aa9.14□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 C7orf71A4D174 169 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 H3BMM0 161 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ORM1P02763 201 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 S100A6P06703 90 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 OR5AL1P0C617 328 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 DEFB131AP59861 70 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 AMTNQ6UX39 209 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 FER1L6-AS1Q8NA97 138 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SSBP4Q9BWG4 385 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SETD2Q9BYW2 2564 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SORL1Q92673 2214 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 IGKV3D-20A0A0C4DH25 116 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 SNAI2O43623 268 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF705DP0CH99 300 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 ZNF705BP0CI00 300 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 PRR9Q5T870 116 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 C9orf66Q5T8R8 295 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 MRPL54Q6P161 138 aaKnown RBP9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 FRZBQ92765 325 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
NEDD8-MDP1-203ENST00000604306 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 302 ms