RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 G3V4G9 280 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 MT-ND4LP03901 98 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 ERVFC1-1P60608 527 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 OR5I1Q13606 314 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 DEFB125Q8N687 156 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 ZFAND2AQ8N6M9 145 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 SFRP2Q96HF1 295 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 WFDC10AQ9H1F0 79 aa13.71□□□□□ -0.21
SSBP4-212ENST00000601919 FABP5P3A8MUU1 101 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 PPP1R2P9O14990 202 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 KRTAP10-11P60412 298 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 IBA57Q5T440 356 aaKnown RBP13.7□□□□□ -0.22
SSBP4-212ENST00000601919 MORN3Q6PF18 240 aaPredicted RBP13.7□□□□□ -0.22
SSBP4-212ENST00000601919 FAM231DQ6ZW35 169 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 Q8N1Y9 231 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
SSBP4-212ENST00000601919 PFN1P07737 140 aaKnown RBP13.69□□□□□ -0.22
SSBP4-212ENST00000601919 RNASE4P34096 147 aaKnown RBP13.69□□□□□ -0.22
SSBP4-212ENST00000601919 SPINK13Q1W4C9 94 aa13.69□□□□□ -0.22
SSBP4-212ENST00000601919 ANAPC16Q96DE5 110 aa13.69□□□□□ -0.22
SSBP4-212ENST00000601919 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
SSBP4-212ENST00000601919 OSTCQ9NRP0 149 aa13.69□□□□□ -0.22
SSBP4-212ENST00000601919 TRRAPQ9Y4A5 3859 aa13.69□□□□□ -0.22
SSBP4-212ENST00000601919 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 C7orf71A4D174 169 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
SSBP4-212ENST00000601919 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
SSBP4-212ENST00000601919 J3KRW8 73 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 M0R2Z0 102 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 P01737 135 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
SSBP4-212ENST00000601919 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 C1QTNF4Q9BXJ3 329 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 ANK2Q01484 3957 aa13.68□□□□□ -0.22
SSBP4-212ENST00000601919 C7orf77A4D0Y5 90 aa13.67□□□□□ -0.22
SSBP4-212ENST00000601919 C19orf71A6NCJ1 209 aa13.67□□□□□ -0.22
SSBP4-212ENST00000601919 SH2D1AO60880 128 aa13.67□□□□□ -0.22
SSBP4-212ENST00000601919 Q6AWC8 147 aa13.67□□□□□ -0.22
SSBP4-212ENST00000601919 RNASE7Q9H1E1 156 aaKnown RBP13.67□□□□□ -0.22
SSBP4-212ENST00000601919 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
SSBP4-212ENST00000601919 A0A087WWC5 75 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-212ENST00000601919 ZNF705GA8MUZ8 300 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-212ENST00000601919 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
SSBP4-212ENST00000601919 RPL35AP18077 110 aaKnown RBP13.66□□□□□ -0.22
SSBP4-212ENST00000601919 CRIP1P50238 77 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 ZNF80P51504 273 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-212ENST00000601919 BTN1A1Q13410 526 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 RNF212Q495C1 297 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 NUDT10Q8NFP7 164 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 NUDT11Q96G61 164 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
SSBP4-212ENST00000601919 H7BYZ3 331 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 INSP01308 110 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 FXYD7P58549 80 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 PRR9Q5T870 116 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 GFI1BQ5VTD9 330 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 LINC00322Q6ZN03 302 aaPredicted RBP13.65□□□□□ -0.22
SSBP4-212ENST00000601919 RPP21Q9H633 154 aaKnown RBP13.65□□□□□ -0.22
SSBP4-212ENST00000601919 TMEM242Q9NWH2 141 aa13.65□□□□□ -0.22
SSBP4-212ENST00000601919 TRAV12-2A0A075B6T6 113 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 XKRY2A2RUG3 117 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 APOC4P55056 127 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 CT83Q5H943 113 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 KPRPQ5T749 579 aaPredicted RBP13.64□□□□□ -0.23
SSBP4-212ENST00000601919 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
SSBP4-212ENST00000601919 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 KIR2DL5BA0A0G2JPC4 375 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 TMEM189A5PLL7 270 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 ORM1P02763 201 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 RPS20P60866 119 aaKnown RBP13.63□□□□□ -0.23
SSBP4-212ENST00000601919 KIR3DS1Q14943 382 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 KIR2DL5AQ8N109 375 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 OR2D3Q8NGH3 330 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 KIR2DL5BQ8NHK3 375 aa13.63□□□□□ -0.23
SSBP4-212ENST00000601919 PKD1L1Q8TDX9 2849 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 A8MWL6 223 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 A8MZ25 164 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
SSBP4-212ENST00000601919 IGHV4-30-4P0DP06 118 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 LINC01559Q495D7 138 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 TMEM256Q8N2U0 113 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 XCL2Q9UBD3 114 aa13.62□□□□□ -0.23
SSBP4-212ENST00000601919 ZNF324O75467 553 aaPredicted RBP13.61□□□□□ -0.23
SSBP4-212ENST00000601919 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
SSBP4-212ENST00000601919 ATRAIDQ6UW56 229 aa13.61□□□□□ -0.23
SSBP4-212ENST00000601919 FAM159AQ6UWV7 190 aa13.61□□□□□ -0.23
SSBP4-212ENST00000601919 KCNS1Q96KK3 526 aa13.61□□□□□ -0.23
SSBP4-212ENST00000601919 NAGKQ9UJ70 344 aa13.61□□□□□ -0.23
SSBP4-212ENST00000601919 V9GYV3 84 aa13.61□□□□□ -0.23
SSBP4-212ENST00000601919 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
SSBP4-212ENST00000601919 IMMP2LQ96T52 175 aa13.6□□□□□ -0.23
SSBP4-212ENST00000601919 TMEM208Q9BTX3 173 aa13.6□□□□□ -0.23
SSBP4-212ENST00000601919 GOLT1BQ9Y3E0 138 aa13.6□□□□□ -0.23
SSBP4-212ENST00000601919 UBE2CO00762 179 aa13.59□□□□□ -0.23
SSBP4-212ENST00000601919 TSKUQ8WUA8 353 aa13.59□□□□□ -0.23
SSBP4-212ENST00000601919 PYGO2Q9BRQ0 406 aa13.59□□□□□ -0.23
SSBP4-212ENST00000601919 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms