RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 H3BUA1 57 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 IGLL1P15814 213 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 MRPL51Q4U2R6 128 aaKnown RBP12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 Q6ZN92 141 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 PRELID3AQ96N28 172 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 HIF1ANQ9NWT6 349 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 TRBV12-3P01733 135 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 TMEM78Q5T7P6 136 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 GLMPQ8WWB7 406 aa12.12□□□□□ -0.47
SSR4P1-203ENST00000599569 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 NDUFA4O00483 81 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 BLCAPP62952 87 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 AVPP01185 164 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 UNQ9165/PRO28630Q6UXU0 137 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 C9orf47Q6ZRZ4 202 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
SSR4P1-203ENST00000599569 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 DSCR9P59020 149 aa12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 SIGLEC8Q9NYZ4 499 aa12.1□□□□□ -0.47
SSR4P1-203ENST00000599569 LOC389332A0A1B0GUA5 103 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 TCAPO15273 167 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 KLK15Q9H2R5 256 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 BEX4Q9NWD9 120 aaPredicted RBP12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 MSRB1Q9NZV6 116 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 UNC79Q9P2D8 2635 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 CKS2P33552 79 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 Q6ZS46 218 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 C9orf139Q6ZV77 190 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 ZNF747Q9BV97 191 aa12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 TIMM8BQ9Y5J9 83 aaPredicted RBP12.09□□□□□ -0.47
SSR4P1-203ENST00000599569 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 PF4V1P10720 104 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 GATA3P23771 443 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 BATFQ16520 125 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 TSPOP30536 169 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
SSR4P1-203ENST00000599569 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 A0A096LNJ9 63 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 NPYP01303 97 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 IGLV1-40P01703 118 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 GPHB5Q86YW7 130 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 PDZD2O15018 2839 aa12.07□□□□□ -0.48
SSR4P1-203ENST00000599569 A0A0G2JLM5 398 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 SMKR1H3BMG3 65 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 SLC25A16P16260 332 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 Q5PR19 223 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 MCRIP2Q9BUT9 160 aaKnown RBP12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 NPFFR1Q9GZQ6 430 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 H0Y8G0 127 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
SSR4P1-203ENST00000599569 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 PPBPP02775 128 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 COL5A1-AS1Q5SY13 56 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 PRSS57Q6UWY2 283 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 LCNL1Q6ZST4 164 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 LRRC75A-AS1Q8N1F1 130 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 ZNF738Q8NE65 137 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 LENEPQ9Y5L5 61 aa12.05□□□□□ -0.48
SSR4P1-203ENST00000599569 HSBP1L1C9JCN9 74 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 SOCS3O14543 225 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 NCR2O95944 276 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 A0A096LNT2 108 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 TCF21O43680 179 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 CFHR3Q02985 330 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 FOXE3Q13461 319 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 KRTAP1-3Q8IUG1 177 aa12.04□□□□□ -0.48
SSR4P1-203ENST00000599569 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
SSR4P1-203ENST00000599569 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
SSR4P1-203ENST00000599569 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
SSR4P1-203ENST00000599569 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
SSR4P1-203ENST00000599569 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
SSR4P1-203ENST00000599569 OVOL1O14753 267 aa12.02□□□□□ -0.49
SSR4P1-203ENST00000599569 HBDP02042 147 aa12.02□□□□□ -0.49
SSR4P1-203ENST00000599569 Q6ZQT7 251 aa12.02□□□□□ -0.49
SSR4P1-203ENST00000599569 Q96MF0 132 aa12.02□□□□□ -0.49
SSR4P1-203ENST00000599569 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
SSR4P1-203ENST00000599569 OR10J6PQ8NGY7 276 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms