RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.06
H3F3B-212ENST00000592643 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
H3F3B-212ENST00000592643 EPDR1Q9UM22 224 aa8.4□□□□□ -1.06
H3F3B-212ENST00000592643 UMAD1C9J7I0 102 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 GPX1P07203 203 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 TPT1P13693 172 aaKnown RBP8.39□□□□□ -1.07
H3F3B-212ENST00000592643 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
H3F3B-212ENST00000592643 CCL20P78556 96 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 IQCF2Q8IXL9 164 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 CMTM2Q8TAZ6 248 aa8.39□□□□□ -1.07
H3F3B-212ENST00000592643 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
H3F3B-212ENST00000592643 ZNF80P51504 273 aaPredicted RBP8.38□□□□□ -1.07
H3F3B-212ENST00000592643 Q6AWC8 147 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 PYGO2Q9BRQ0 406 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 NIPSNAP3BQ9BS92 247 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 C11orf21Q9P2W6 132 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 APLNQ9ULZ1 77 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 LENEPQ9Y5L5 61 aa8.38□□□□□ -1.07
H3F3B-212ENST00000592643 DEFB131BA0A096LNP1 70 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 A0A1B0GV50 99 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 LYRM9A8MSI8 78 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 F6UZH7 168 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 ATP5G3P48201 142 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 FAM74A1Q5RGS3 127 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 SLC51BQ86UW2 128 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 SFT2D1Q8WV19 159 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
H3F3B-212ENST00000592643 GSN-AS1Q9NRJ2 163 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
H3F3B-212ENST00000592643 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 SULT1A2P50226 295 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 ZFP69Q49AA0 526 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 DPPA3Q6W0C5 159 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 CYB561D1Q8N8Q1 229 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 C2CD4CQ8TF44 421 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 ATG101Q9BSB4 218 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 KLF12Q9Y4X4 402 aa8.36□□□□□ -1.07
H3F3B-212ENST00000592643 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 IGLL5B9A064 214 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 PEX7O00628 323 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 PAGE4O60829 102 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 EIF5AP63241 154 aaKnown RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 FLI1Q01543 452 aaPredicted RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 DAZ2Q13117 558 aaKnown RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 MUC21Q5SSG8 566 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 Q6ZTI0 123 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 TMEM75Q8N9X5 138 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 TREM1Q9NP99 234 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 MDFICQ9P1T7 246 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
H3F3B-212ENST00000592643 DNAH2Q9P225 4427 aa8.35□□□□□ -1.07
H3F3B-212ENST00000592643 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 IGHV4-4A0A075B6R2 117 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 CRIP1P50238 77 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 DAD1P61803 113 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
H3F3B-212ENST00000592643 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 CBY3A6NI87 242 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 GNRH2O43555 120 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 IFNA7P01567 189 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 TCL1AP56279 114 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 Q86TA4 180 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 ARL2-SNX15V9GYD0 113 aa8.33□□□□□ -1.08
H3F3B-212ENST00000592643 SCO2A0A1W2PP80 73 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 RGS13O14921 159 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 SPINK4O60575 86 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 HTN3P15516 51 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 HOXA5P20719 270 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 RAB5CP51148 216 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 IBA57Q5T440 356 aaKnown RBP8.32□□□□□ -1.08
H3F3B-212ENST00000592643 CST9LP1Q5W188 147 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
H3F3B-212ENST00000592643 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
H3F3B-212ENST00000592643 IGHV3-16A0A0C4DH30 117 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GAGE12BA1L429 117 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GAGE7O76087 117 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GCGP01275 180 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 TYMSP04818 313 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
H3F3B-212ENST00000592643 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms