RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SMCO3A2RU48 225 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF98A6NK75 572 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 ZFP92A6NM28 416 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF705EA8MWA4 302 aaPredicted RBP3.34□□□□□ -1.87
ERCC1-216ENST00000592444 DIRC3C9JPN6 131 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 C17orf112F2Z3M2 114 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 K7EMT4 169 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 IGLV2-11P01706 119 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 IGLV2-8P01709 118 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 MBP02144 154 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 IL4P05112 153 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 CLEC3BP05452 202 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 SRP19P09132 144 aaKnown RBP3.34□□□□□ -1.87
ERCC1-216ENST00000592444 PYYP10082 97 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
ERCC1-216ENST00000592444 RHOBP62745 196 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 BLOC1S1P78537 153 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 ACOT6Q3I5F7 207 aaPredicted RBP3.34□□□□□ -1.87
ERCC1-216ENST00000592444 AKR1C8PQ5T2L2 129 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 FAM78BQ5VT40 261 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 EIF5AL1Q6IS14 154 aaKnown RBP3.34□□□□□ -1.87
ERCC1-216ENST00000592444 FAM122CQ6P4D5 195 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 C16orf54Q6UWD8 224 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 CLEC19AQ6UXS0 136 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 PQLC2Q6ZP29 291 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 Q6ZRU5 148 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 Q6ZSA8 131 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 SCXQ7RTU7 201 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 COMMD7Q86VX2 200 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 GBGT1Q8N5D6 347 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 OR10G7Q8NGN6 311 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 DCANP1Q8TF63 244 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 EEF1AKMT3Q96AZ1 226 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 PFDN5Q99471 154 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 DNAJC4Q9NNZ3 241 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 THYN1Q9P016 225 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 TRBV19A0A075B6N1 114 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 A0A1W2PRE2 83 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 TMEM250H0YL14 139 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 HMGB3O15347 200 aaKnown RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 GNG7O60262 68 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 RD3LP0DJH9 198 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 ARL3P36405 182 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 ATP5G3P48201 142 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 PSMB3P49720 205 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 RPL37AP61513 92 aaKnown RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 LYZP61626 148 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 MEF2BQ02080 365 aaPredicted RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 ATP5G2Q06055 141 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 FOXI1Q12951 378 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 PDE6HQ13956 83 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 KHDC3LQ587J8 217 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 C1orf194Q5T5A4 169 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 C10orf113Q5VZT2 155 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 MORN3Q6PF18 240 aaPredicted RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 LCN15Q6UWW0 184 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 COX8CQ7Z4L0 72 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 SCGB1C1Q8TD33 95 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 MARC2Q969Z3 335 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 LINC00052Q96N35 136 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 YPEL4Q96NS1 127 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 RNF2Q99496 336 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 SPAG8Q99932 426 aaPredicted RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 DERL1Q9BUN8 251 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 SMDT1Q9H4I9 107 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 DAZ1Q9NQZ3 744 aaKnown RBP3.33□□□□□ -1.88
ERCC1-216ENST00000592444 DOK5Q9P104 306 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 HIGD1AQ9Y241 93 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 KLF12Q9Y4X4 402 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 NEBP20929 6669 aa3.33□□□□□ -1.88
ERCC1-216ENST00000592444 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 IGHV7-4-1A0A0J9YVY3 117 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 TRBV6-1A0A0K0K1D8 114 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 ZNF320A2RRD8 509 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 TMEM218A2RU14 115 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 CHEK1O14757 476 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 NUPL2O15504 423 aaKnown RBP3.32□□□□□ -1.88
ERCC1-216ENST00000592444 CYB5BO43169 146 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 COX7A2P2O60397 106 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 GGCTO75223 188 aaKnown RBP3.32□□□□□ -1.88
ERCC1-216ENST00000592444 HYPMO75409 117 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 CXorf1O96002 111 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 HBE1P02100 147 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 SPART-AS1P0CW21 52 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 HIST1H1EP10412 219 aaKnown RBP3.32□□□□□ -1.88
ERCC1-216ENST00000592444 RELQ04864 619 aaPredicted RBP3.32□□□□□ -1.88
ERCC1-216ENST00000592444 RAB31Q13636 194 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 NDUFA5Q16718 116 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 GUK1Q16774 197 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 Q56UQ5 140 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 FAM24BQ8N5W8 94 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 ARL6IP6Q8N6S5 226 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 CYB561D1Q8N8Q1 229 aa3.32□□□□□ -1.88
ERCC1-216ENST00000592444 OR1L4Q8NGR5 311 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms