RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 SRIP30626 198 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 CCR2P41597 374 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 RPL28P46779 137 aaKnown RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 SRP9P49458 86 aaKnown RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 UBE2BP63146 152 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 MYL5Q02045 173 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 NDUFA5Q16718 116 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 DEFB134Q4QY38 66 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 KHDC3LQ587J8 217 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 DPPA3Q6W0C5 159 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 DYNAPQ8N1N2 210 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 TMEM86AQ8N2M4 240 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 SIGLECL1Q8N7X8 197 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 ST6GALNAC3Q8NDV1 305 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 OR51T1Q8NGJ9 327 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 SLAMF6Q96DU3 332 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 TCEAL4Q96EI5 215 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 MRPS24Q96EL2 167 aaKnown RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 ADAT3Q96EY9 351 aaPredicted RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 CCDC115Q96NT0 180 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 TSC22D3Q99576 134 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 MARCOQ9UEW3 520 aaPredicted RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 RBM7Q9Y580 266 aaKnown RBP1.72□□□□□ -2.13
TPM4-214ENST00000591645 NUBP2Q9Y5Y2 271 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 R4GN34 69 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 HSPE1-MOB4S4R3N1 261 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 HEATR5AQ86XA9 2040 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 MED23Q9ULK4 1368 aa1.72□□□□□ -2.13
TPM4-214ENST00000591645 OBSL1O75147 1896 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 ANK3Q12955 4377 aaKnown RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 BORCS7-ASMTA0A0B4J1R7 106 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 A0A0D9SG52 128 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 A0A0J9YX75 114 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 H7C2G1 150 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 DEGS1O15121 323 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 DBIP07108 87 aaKnown RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 BCL2P10415 239 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 LGALS3P17931 250 aaKnown RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 PLCXD2Q0VAA5 305 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 RTL8BQ17RB0 113 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 RPP25LQ8N5L8 163 aaKnown RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 OR4C16Q8NGL9 310 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 TMEM106AQ96A25 262 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 BORCS8Q96FH0 119 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 GPX7Q96SL4 187 aaPredicted RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 EPDR1Q9UM22 224 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 HHLA3Q9XRX5 114 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 NUP210Q8TEM1 1887 aaPredicted RBP1.71□□□□□ -2.14
TPM4-214ENST00000591645 SEC16AO15027 2179 aa1.71□□□□□ -2.14
TPM4-214ENST00000591645 DOCK2Q92608 1830 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 LYSTQ99698 3801 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 HECTD4Q9Y4D8 3996 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 ATG2AQ2TAZ0 1938 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 TRDV1A0A1B0GX56 115 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 MEIS3P1A6NDR6 274 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 G3V3Q6 166 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 EVX1P49640 407 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 POLR2HP52434 150 aaKnown RBP1.7□□□□□ -2.14
TPM4-214ENST00000591645 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
TPM4-214ENST00000591645 CCDC58Q4VC31 144 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 C1orf140Q5VVS0 124 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 OR4D11Q8NGI4 311 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 OR5A1Q8NGJ0 315 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 SLC25A21Q9BQT8 299 aaPredicted RBP1.7□□□□□ -2.14
TPM4-214ENST00000591645 YIPF3Q9GZM5 350 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 TMEM126AQ9H061 195 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 TMEM133Q9H2Q1 129 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 NHP2Q9NX24 153 aaKnown RBP1.7□□□□□ -2.14
TPM4-214ENST00000591645 RASL12Q9NYN1 266 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 JPT1Q9UK76 154 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 MED31Q9Y3C7 131 aa1.7□□□□□ -2.14
TPM4-214ENST00000591645 BAZ2BQ9UIF8 2168 aaKnown RBP1.69□□□□□ -2.14
TPM4-214ENST00000591645 SHANK1Q9Y566 2161 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 STAB2Q8WWQ8 2551 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 EML6Q6ZMW3 1958 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 TRAV36DV7A0A075B6V5 113 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 TRBV10-2A0A0K0K1G8 114 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 A0A1B0GX51 115 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 C7orf71A4D174 169 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 C3orf84H3BNL1 204 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 TMEM256-PLSCR3K7ERE1 68 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 OR2T1O43869 369 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 CST7O76096 145 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 METTL15P1P0C7V9 234 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 HRES1P13985 223 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 S100A11P31949 105 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
TPM4-214ENST00000591645 FXYD2P54710 66 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 NDUFA6P56556 154 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 TMEM258P61165 79 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 SUPT4H1P63272 117 aaKnown RBP1.69□□□□□ -2.14
TPM4-214ENST00000591645 ZNF90Q03938 601 aa1.69□□□□□ -2.14
TPM4-214ENST00000591645 EIF3IQ13347 325 aaKnown RBP1.69□□□□□ -2.14
TPM4-214ENST00000591645 OR8B8Q15620 311 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms