RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 NRN1Q9NPD7 142 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 ESM1Q9NQ30 184 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 TMSB15BA0A087X1C1 80 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 TMEM213A2RRL7 107 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 FAM231BA6NCW3 169 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 IFITM10A6NMD0 228 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 OVOL1O14753 267 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 SRD5A1P18405 259 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-206ENST00000588860 CAMPP49913 170 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-206ENST00000588860 ZNF138P52744 262 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 SYNJ2BPP57105 145 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 HBBP68871 147 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
SMAD4-206ENST00000588860 GDF5OSQ5U4N7 250 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 C18orf65Q6ZTR6 163 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 AGPAT4-IT1Q9H0P7 198 aa6.64□□□□□ -1.35
SMAD4-206ENST00000588860 A0A1B0GUS0 222 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 GRIFINA4D1Z8 144 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 A8MWP6 167 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 LGALS9O00182 355 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 LY6G6DO95868 133 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 ZNF705DP0CH99 300 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-206ENST00000588860 ZNF705BP0CI00 300 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-206ENST00000588860 FABP4P15090 132 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 CRISP2P16562 243 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 SLURP1P55000 103 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 RPS20P60866 119 aaKnown RBP6.63□□□□□ -1.35
SMAD4-206ENST00000588860 DEFB136Q30KP8 78 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 SAMD13Q5VXD3 122 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 C9orf47Q6ZRZ4 202 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 WFDC3Q8IUB2 231 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 OR10J6PQ8NGY7 276 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 C4orf3Q8WVX3 66 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 BORCS7Q96B45 105 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
SMAD4-206ENST00000588860 SSBP4Q9BWG4 385 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-206ENST00000588860 C2orf70A6NJV1 201 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 LINC01619G3V211 115 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 M0QZ24 198 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 ORM1P02763 201 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
SMAD4-206ENST00000588860 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 SRIP30626 198 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 ID1P41134 155 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 SRSF2Q01130 221 aaKnown RBP6.62□□□□□ -1.35
SMAD4-206ENST00000588860 HIST1H1AQ02539 215 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-206ENST00000588860 SLAQ13239 276 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 RIGQ13278 110 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 TCTEX1D4Q5JR98 221 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 PRR31Q5SQ13 230 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 Q6AWC8 147 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 ZNF418Q8TF45 676 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-206ENST00000588860 DPF1Q92782 380 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 C12orf57Q99622 126 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 TMEM160Q9NX00 188 aa6.62□□□□□ -1.35
SMAD4-206ENST00000588860 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 AMBPP02760 352 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 ARMS2P0C7Q2 107 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 TFPI2P48307 235 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 FOXA3P55318 350 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-206ENST00000588860 DEFB1P60022 68 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 KLF5Q13887 457 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-206ENST00000588860 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 TMEM256Q8N2U0 113 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 DUX3Q96PT4 197 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 HIST1H2BLQ99880 126 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 MS4A6AQ9H2W1 248 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 HIVEP2P31629 2446 aa6.61□□□□□ -1.35
SMAD4-206ENST00000588860 A0A1B0GW15 77 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 F2Z2F3 143 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 F6UB75 175 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 Q0VG73 95 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 FER1L6-AS1Q8NA97 138 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 OR11H1Q8NG94 326 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 OR8A1Q8NGG7 326 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 DCANP1Q8TF63 244 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-206ENST00000588860 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 TP53TG3Q9ULZ0 132 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 AGRNO00468 2067 aa6.6□□□□□ -1.35
SMAD4-206ENST00000588860 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 INAFM1C9JVW0 142 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 J3KRW8 73 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 K7EQG2 157 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 NUPR1O60356 82 aa6.59□□□□□ -1.35
SMAD4-206ENST00000588860 SERF1AO75920 110 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms