RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MRPL32Q9BYC8 188 aaKnown RBP12.42□□□□□ -0.42
CCDC43-204ENST00000588687 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 K7EP13 123 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 SFTA3P0C7M3 94 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 AAMDCQ9H7C9 122 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 MDFICQ9P1T7 246 aa12.41□□□□□ -0.42
CCDC43-204ENST00000588687 C5orf51A6NDU8 294 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 SMR3BP02814 79 aaPredicted RBP12.4□□□□□ -0.42
CCDC43-204ENST00000588687 ZNF138P52744 262 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 HBG1P69891 147 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 HBG2P69892 147 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 HAMPP81172 84 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 RAB32Q13637 225 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
CCDC43-204ENST00000588687 TRAV9-2A0A087WT02 112 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 E5RGE8 158 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 LYRM1O43325 122 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 IFNA5P01569 189 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 TCRBP04435 133 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 PVALBP20472 110 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-204ENST00000588687 GCSHP23434 173 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 SRIP30626 198 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 S100A10P60903 97 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 ZNF266Q14584 549 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-204ENST00000588687 STX12Q86Y82 276 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 RASL10AQ92737 203 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
CCDC43-204ENST00000588687 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 LRCOL1A6NCL2 159 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 GYPEP15421 78 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
CCDC43-204ENST00000588687 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
CCDC43-204ENST00000588687 Q6AWC8 147 aa12.37□□□□□ -0.43
CCDC43-204ENST00000588687 THAP6Q8TBB0 222 aa12.37□□□□□ -0.43
CCDC43-204ENST00000588687 GPN1Q9HCN4 374 aaPredicted RBP12.37□□□□□ -0.43
CCDC43-204ENST00000588687 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
CCDC43-204ENST00000588687 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
CCDC43-204ENST00000588687 OR10J4P0C629 311 aa12.36□□□□□ -0.43
CCDC43-204ENST00000588687 EVI2AP22794 236 aa12.36□□□□□ -0.43
CCDC43-204ENST00000588687 OR51M1Q9H341 326 aa12.36□□□□□ -0.43
CCDC43-204ENST00000588687 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
CCDC43-204ENST00000588687 ORM1P02763 201 aa12.35□□□□□ -0.43
CCDC43-204ENST00000588687 CRYGDP07320 174 aa12.35□□□□□ -0.43
CCDC43-204ENST00000588687 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
CCDC43-204ENST00000588687 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
CCDC43-204ENST00000588687 NHLH2Q02577 135 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 Q6ZSN1 163 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 SPXQ9BT56 116 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 PAXXQ9BUH6 204 aa12.34□□□□□ -0.43
CCDC43-204ENST00000588687 TRAV4A0A0B4J268 109 aa12.33□□□□□ -0.44
CCDC43-204ENST00000588687 C9JCJ5 164 aa12.33□□□□□ -0.44
CCDC43-204ENST00000588687 TIRAPP58753 221 aa12.33□□□□□ -0.44
CCDC43-204ENST00000588687 C10orf126Q8N4M7 172 aa12.33□□□□□ -0.44
CCDC43-204ENST00000588687 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.44
CCDC43-204ENST00000588687 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
CCDC43-204ENST00000588687 IGLV5-52A0A0A0MRZ9 124 aa12.32□□□□□ -0.44
CCDC43-204ENST00000588687 NTN5Q8WTR8 489 aaPredicted RBP12.32□□□□□ -0.44
CCDC43-204ENST00000588687 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
CCDC43-204ENST00000588687 LENEPQ9Y5L5 61 aa12.32□□□□□ -0.44
CCDC43-204ENST00000588687 TRGV11A0A075B6L2 103 aa12.31□□□□□ -0.44
CCDC43-204ENST00000588687 LINC01556Q5JQF7 62 aa12.31□□□□□ -0.44
CCDC43-204ENST00000588687 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
CCDC43-204ENST00000588687 FAM30AQ9NZY2 134 aa12.31□□□□□ -0.44
CCDC43-204ENST00000588687 IGHV3-16A0A0C4DH30 117 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 FAM229AH3BQW9 127 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
CCDC43-204ENST00000588687 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
CCDC43-204ENST00000588687 Q8N814 137 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 SLC25A31Q9H0C2 315 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 OR5AC2Q9NZP5 309 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
CCDC43-204ENST00000588687 IBA57-AS1B1ANH7 110 aa12.29□□□□□ -0.44
CCDC43-204ENST00000588687 H0YIZ8 118 aa12.29□□□□□ -0.44
CCDC43-204ENST00000588687 OR7C2O60412 319 aa12.29□□□□□ -0.44
CCDC43-204ENST00000588687 UBE2L3P68036 154 aaKnown RBP12.29□□□□□ -0.44
CCDC43-204ENST00000588687 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
CCDC43-204ENST00000588687 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
CCDC43-204ENST00000588687 M0R2P5 195 aa12.28□□□□□ -0.44
CCDC43-204ENST00000588687 CSN1S1P47710 185 aa12.28□□□□□ -0.44
CCDC43-204ENST00000588687 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
CCDC43-204ENST00000588687 KCNIP2Q9NS61 270 aa12.28□□□□□ -0.44
CCDC43-204ENST00000588687 GNRH2O43555 120 aa12.27□□□□□ -0.45
CCDC43-204ENST00000588687 Q6ZSA8 131 aa12.27□□□□□ -0.45
CCDC43-204ENST00000588687 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
CCDC43-204ENST00000588687 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
CCDC43-204ENST00000588687 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
CCDC43-204ENST00000588687 TYMSP04818 313 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms