RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SYNJ2BPP57105 145 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 ERCC8Q13216 396 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
LINC01538-201ENST00000588074 PHF3Q92576 2039 aaKnown RBP4.29□□□□□ -1.72
LINC01538-201ENST00000588074 NABP2Q9BQ15 211 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 DYNLRB1Q9NP97 96 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 TRAV41A0A0B4J266 112 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 A0A0D9SEW6 157 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 BUB3O43684 328 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 CDK2AP2O75956 126 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 SAA4P35542 130 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 SRSF12Q8WXF0 261 aaKnown RBP4.29□□□□□ -1.72
LINC01538-201ENST00000588074 FMC1Q96HJ9 113 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 FOXC2Q99958 501 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 U3KQK5 164 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 FER1L5A0AVI2 2057 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 THADAQ6YHU6 1953 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 M0R1B8 84 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 IGKV1-5P01602 117 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 IGLV3-27P01718 113 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 PLNP26678 52 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
LINC01538-201ENST00000588074 DAZ2Q13117 558 aaKnown RBP4.28□□□□□ -1.72
LINC01538-201ENST00000588074 CRIP3Q6Q6R5 217 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF497Q6ZNH5 498 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
LINC01538-201ENST00000588074 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
LINC01538-201ENST00000588074 CCL28Q9NRJ3 127 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
LINC01538-201ENST00000588074 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 A0A0B4J2C4 111 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 PLAC8L1A1L4L8 177 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 SPRY3O43610 288 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 SS18L1O75177 396 aaPredicted RBP4.27□□□□□ -1.73
LINC01538-201ENST00000588074 IGKV1-39P01597 117 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 IGKV1D-39P04432 117 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 IFI27P40305 119 aaPredicted RBP4.27□□□□□ -1.73
LINC01538-201ENST00000588074 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
LINC01538-201ENST00000588074 C2orf82Q6UX34 121 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 LINC00305Q7Z4B0 112 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 SLC25A15Q9Y619 301 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 ATG2BQ96BY7 2078 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
LINC01538-201ENST00000588074 TMEM243Q9BU79 118 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 PAXXQ9BUH6 204 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 TAC3Q9UHF0 121 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 LAMA3Q16787 3333 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 COL4A2P08572 1712 aa4.27□□□□□ -1.73
LINC01538-201ENST00000588074 PAX4O43316 350 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 CCL5P13501 91 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 CRIP2P52943 208 aaPredicted RBP4.26□□□□□ -1.73
LINC01538-201ENST00000588074 LAGE3Q14657 143 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 ORMDL2Q53FV1 153 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 FHL5Q5TD97 284 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 CXCL17Q6UXB2 119 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 CD177Q8N6Q3 437 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 Q8N8P6 123 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 ZNF799Q96GE5 643 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 HES7Q9BYE0 225 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 IGKV1D-13A0A0B4J2D9 117 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 IGKV1-13P0DP09 117 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 CD24P25063 80 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 UBE2E1P51965 193 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 ZNF137PP52743 207 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 UBE2E2Q96LR5 201 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 Q9HAA7 133 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 ESM1Q9NQ30 184 aa4.26□□□□□ -1.73
LINC01538-201ENST00000588074 RAI1Q7Z5J4 1906 aaPredicted RBP4.26□□□□□ -1.73
LINC01538-201ENST00000588074 RALGAPA1Q6GYQ0 2036 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
LINC01538-201ENST00000588074 MIC13Q5XKP0 118 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 C8orf49Q96NF6 230 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
LINC01538-201ENST00000588074 NGFP01138 241 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 PRSS1P07477 247 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 P0C879 139 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 CFC1P0CG37 223 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 FHL2Q14192 279 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 Q6ZPA2 131 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
LINC01538-201ENST00000588074 CDH23Q9H251 3354 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 MYO9BQ13459 2157 aa4.24□□□□□ -1.73
LINC01538-201ENST00000588074 LAMA2P24043 3122 aaKnown RBP4.24□□□□□ -1.73
LINC01538-201ENST00000588074 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms