RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 UBE2E1P51965 193 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 PIFOQ8TCI5 191 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 C9orf118A6NHY6 69 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 EVI2AP22794 236 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 CCDC140Q96MF4 163 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 PIEZO1Q92508 2521 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 CLEC19AQ6UXS0 136 aa12.97□□□□□ -0.33
PRKCSH-205ENST00000587327 GAGE10A6NGK3 116 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 GATA1P15976 413 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 ODF1Q14990 250 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 HHLA3Q9XRX5 114 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 MED13LQ71F56 2210 aa12.96□□□□□ -0.33
PRKCSH-205ENST00000587327 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.34
PRKCSH-205ENST00000587327 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.34
PRKCSH-205ENST00000587327 EFNA4P52798 201 aa12.96□□□□□ -0.34
PRKCSH-205ENST00000587327 KIR3DS1Q14943 382 aa12.96□□□□□ -0.34
PRKCSH-205ENST00000587327 AP1S3Q96PC3 154 aa12.96□□□□□ -0.34
PRKCSH-205ENST00000587327 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
PRKCSH-205ENST00000587327 G3V318 75 aa12.95□□□□□ -0.34
PRKCSH-205ENST00000587327 LINC01548A6NM66 108 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 PRSS1P07477 247 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 SAA4P35542 130 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 UFSP1Q6NVU6 142 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 Q8N8P6 123 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 GTF2H5Q6ZYL4 71 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 METTL26Q96S19 204 aa12.94□□□□□ -0.34
PRKCSH-205ENST00000587327 CACNA1BQ00975 2339 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 IGLV2-18A0A075B6J9 118 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 OR2K2Q8NGT1 345 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 H3BUT2 72 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 TRGV3P03979 118 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 BPESC1Q9GZL8 116 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 HIF1ANQ9NWT6 349 aa12.93□□□□□ -0.34
PRKCSH-205ENST00000587327 IGKV2D-26A0A0A0MRZ7 120 aa12.92□□□□□ -0.34
PRKCSH-205ENST00000587327 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
PRKCSH-205ENST00000587327 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
PRKCSH-205ENST00000587327 CENPVL3A0A0U1RRI6 287 aa12.92□□□□□ -0.34
PRKCSH-205ENST00000587327 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 IGKCP01834 107 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 SMPXQ9UHP9 88 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 U3KQE9 123 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 PRSS47A8MTI9 375 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 LMO4P61968 165 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 SMIM15Q7Z3B0 74 aa12.91□□□□□ -0.34
PRKCSH-205ENST00000587327 ATP5LO75964 103 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 SMIM17P0DL12 118 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 NRACQ8N912 160 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 FOXC2Q99958 501 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 VPS25Q9BRG1 176 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 HIGD1BQ9P298 99 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 K7EP34 96 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 K7ERU9 68 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 RAB37Q96AX2 223 aa12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 NAA38Q9BRA0 125 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-205ENST00000587327 DPM2O94777 84 aa12.89□□□□□ -0.35
PRKCSH-205ENST00000587327 Q6ZQT7 251 aa12.89□□□□□ -0.35
PRKCSH-205ENST00000587327 C5orf56Q8N8D9 126 aa12.89□□□□□ -0.35
PRKCSH-205ENST00000587327 TRAV26-2A0A0B4J265 109 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 LAGE3Q14657 143 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 TTTY13Q9BZ97 58 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 NPFFO15130 113 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 UFC1Q9Y3C8 167 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 CFAP46Q8IYW2 2715 aa12.88□□□□□ -0.35
PRKCSH-205ENST00000587327 IGHV4-39P01824 125 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 ZC2HC1BQ5TFG8 222 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 GTSCR1Q86UQ5 136 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 A0A1W2PPM0 123 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 MYOZ3Q8TDC0 251 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
PRKCSH-205ENST00000587327 CHAC1Q9BUX1 264 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 SMIM13P0DJ93 91 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 GCSHP23434 173 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 ATP6V0BQ99437 205 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-205ENST00000587327 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
PRKCSH-205ENST00000587327 FXYD2P54710 66 aa12.85□□□□□ -0.35
PRKCSH-205ENST00000587327 SRSF1Q07955 248 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms