RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 IGHV3-11P01762 117 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 CKS2P33552 79 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 RNF185Q96GF1 192 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 C20orf173Q96LM9 149 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 A0A096LNT2 108 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 PPBPP02775 128 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 PRB1P04280 392 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LINC01545Q5VT33 79 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 ZNF843Q8N446 348 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LINC01356Q8N9X3 169 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 NPFFR1Q9GZQ6 430 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 ST20Q9HBF5 79 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 CELSR1Q9NYQ6 3014 aa12.57□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 TSPOP30536 169 aa12.56□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 NPYP01303 97 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LOXL1Q08397 574 aaPredicted RBP12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 FAM208BQ5VWN6 2430 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 OVOL1O14753 267 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 TCAPO15273 167 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 ZNF738Q8NE65 137 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 J3QLI3 93 aa12.54□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 TCF21O43680 179 aa12.54□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 FOXE3Q13461 319 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 PRSS57Q6UWY2 283 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 hDV102S1A0JD36 115 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 SNAI2O43623 268 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 NCR2O95944 276 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 COX6B1P14854 86 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 BATFQ16520 125 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 DEFB112Q30KQ8 113 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 COL5A1-AS1Q5SY13 56 aa12.53□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 HSBP1L1C9JCN9 74 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 HBDP02042 147 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 PRR9Q5T870 116 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 LCNL1Q6ZST4 164 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 K7EMT4 169 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 PSMB8P28062 276 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 PEF1Q9UBV8 284 aaKnown RBP12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 H0Y8G0 127 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 CACNG7P62955 275 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 MCRIP2Q9BUT9 160 aaKnown RBP12.51□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TMEM89A2RUT3 159 aa12.5□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TM4SF20Q53R12 229 aa12.5□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 Q6ZQT7 251 aa12.5□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SMPXQ9UHP9 88 aa12.5□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TNFRSF6BO95407 300 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TMEM95Q3KNT9 176 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 APRG1Q8IVJ8 170 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 ANKRD17O75179 2603 aaKnown RBP12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 CR1P17927 2039 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 MYO18BQ8IUG5 2567 aa12.49□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 LGALS9BQ3B8N2 356 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 LGALS9CQ6DKI2 356 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SMIM15Q7Z3B0 74 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 NXT2Q9NPJ8 142 aaKnown RBP12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 CELSR2Q9HCU4 2923 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 TGFAP01135 160 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 EVI2AP22794 236 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 STPG4Q8N801 248 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 PRSS47A8MTI9 375 aa12.47□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 DEFB125Q8N687 156 aa12.47□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 FSHBP01225 129 aa12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 ZNF25P17030 456 aaPredicted RBP12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 DPF1Q92782 380 aa12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 IFI27L1Q96BM0 104 aa12.46□□□□□ -0.41
APOC4-APOC2-201ENST00000585685 H3BVH4 76 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms