RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 MYCNOSP40205 109 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 PCBD1P61457 104 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 IGLV3-21P80748 117 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-203ENST00000585448 FAM27E3Q08E93 113 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF542PQ5EBM4 170 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 CEMP1Q6PRD7 247 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-203ENST00000585448 MKXQ8IYA7 352 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 WFDC5Q8TCV5 224 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 COX14Q96I36 57 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 TTTY13Q9BZ97 58 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 EXPH5Q8NEV8 1989 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 HCFC1P51610 2035 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 HEATR5BQ9P2D3 2071 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 ARID1AO14497 2285 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 TRBV30A0A0K0K1B3 111 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 LOC389332A0A1B0GUA5 103 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 KNCNA6PVL3 124 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 D6R8Y8 96 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 K7EMI3 77 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 SPRY3O43610 288 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 CXCL13O43927 109 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 CD24P25063 80 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 DUTP33316 252 aaKnown RBP4.66□□□□□ -1.66
SMAD4-203ENST00000585448 SYNJ2BPP57105 145 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 ERVK-16P61578 105 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 STHQ8IWL8 128 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 ITLN1Q8WWA0 313 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF799Q96GE5 643 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF714Q96N38 554 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 PAXXQ9BUH6 204 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 RETNQ9HD89 108 aa4.66□□□□□ -1.66
SMAD4-203ENST00000585448 BEX4Q9NWD9 120 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-203ENST00000585448 PHF3Q92576 2039 aaKnown RBP4.66□□□□□ -1.66
SMAD4-203ENST00000585448 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 F8VRH5 84 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 FCGR3BO75015 233 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 IGHV3-33P01772 117 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 COX6CP09669 75 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 CD70P32970 193 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 CCL11P51671 97 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 DLX1P56177 255 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 Q0VFX4 171 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 EIF4EBP1Q13541 118 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-203ENST00000585448 PAPPA-AS1Q5QFB9 102 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 SCGB1D4Q6XE38 83 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 C10orf105Q8TEF2 133 aa4.65□□□□□ -1.67
SMAD4-203ENST00000585448 RPUSD1Q9UJJ7 312 aaKnown RBP4.65□□□□□ -1.67
SMAD4-203ENST00000585448 C5orf63A6NC05 138 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 ZNF815PA8K554 130 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 ZNF883P0CG24 379 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 LOXP28300 417 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-203ENST00000585448 HOXD3P31249 432 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-203ENST00000585448 CKS2P33552 79 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-203ENST00000585448 NANOS2P60321 138 aaKnown RBP4.64□□□□□ -1.67
SMAD4-203ENST00000585448 ADORA2A-AS1P86434 159 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 LINC01561Q8N1V8 128 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 DAND5Q8N907 189 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 FAM167A-AS1Q96KT0 104 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 OTORQ9NRC9 128 aa4.64□□□□□ -1.67
SMAD4-203ENST00000585448 MRPL35Q9NZE8 188 aaKnown RBP4.64□□□□□ -1.67
SMAD4-203ENST00000585448 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 BCE1O60756 84 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 IGHV3-30P01768 117 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 ARMS2P0C7Q2 107 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 IGHV3-30-5P0DP03 117 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 LIFP15018 202 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 GFERP55789 205 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 MRPL51Q4U2R6 128 aaKnown RBP4.63□□□□□ -1.67
SMAD4-203ENST00000585448 C10orf128Q5T292 105 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 RNF182Q8N6D2 247 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 C16orf95Q9H693 158 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 PCDH15Q96QU1 1955 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 RALGAPA1Q6GYQ0 2036 aa4.63□□□□□ -1.67
SMAD4-203ENST00000585448 TRBV7-1A0A0A6YYK4 115 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 TRAV41A0A0B4J266 112 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 A0A0J9YY99 117 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 H7C423 109 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 BUB3O43684 328 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 COX7A2P2O60397 106 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 NGFP01138 241 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 CRIP2P52943 208 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-203ENST00000585448 CLLU1OSQ5K130 101 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 SFTA2Q6UW10 78 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 LINC00322Q6ZN03 302 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-203ENST00000585448 Q6ZRU5 148 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 Q6ZSV7 163 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 TDHQ8IZJ6 230 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 SLC25A29Q8N8R3 303 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 PRR26Q8N8Z3 221 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 FGFBP3Q8TAT2 258 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 TMEM263Q8WUH6 116 aaKnown RBP4.62□□□□□ -1.67
SMAD4-203ENST00000585448 SRSF12Q8WXF0 261 aaKnown RBP4.62□□□□□ -1.67
SMAD4-203ENST00000585448 FXYD5Q96DB9 178 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 SRXN1Q9BYN0 137 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms