RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 RBAKDNA6NC62 111 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 PGPA6NDG6 321 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 SPINK4O60575 86 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 IGHV3-53P01767 116 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 CCL18P55774 89 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
SRSF1-208ENST00000584773 GNG5P63218 68 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
SRSF1-208ENST00000584773 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 ZNF266Q14584 549 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 VSIG2Q96IQ7 327 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 ARPC5LQ9BPX5 153 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
SRSF1-208ENST00000584773 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
SRSF1-208ENST00000584773 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
SRSF1-208ENST00000584773 GOLT1AQ6ZVE7 132 aa12.49□□□□□ -0.41
SRSF1-208ENST00000584773 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
SRSF1-208ENST00000584773 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
SRSF1-208ENST00000584773 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
SRSF1-208ENST00000584773 ESRGQ1W209 222 aa12.48□□□□□ -0.41
SRSF1-208ENST00000584773 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
SRSF1-208ENST00000584773 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
SRSF1-208ENST00000584773 TRBV7-9A0A0J9YWB2 115 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 F6UZH7 168 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 CDC34P49427 236 aaPredicted RBP12.47□□□□□ -0.41
SRSF1-208ENST00000584773 CMTM2Q8TAZ6 248 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 SGK494Q96LW2 274 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 C18orf15Q96N68 181 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 KRTAP1-5Q9BYS1 174 aa12.47□□□□□ -0.41
SRSF1-208ENST00000584773 A0A096LPF7 62 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 RNF222A6NCQ9 220 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 GIPP09681 153 aaPredicted RBP12.46□□□□□ -0.41
SRSF1-208ENST00000584773 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 Q6AWC8 147 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 NAGKQ9UJ70 344 aa12.46□□□□□ -0.41
SRSF1-208ENST00000584773 FXYD6-FXYD2A0A087WZ82 144 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 STAG3L2P0CL84 134 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 STAG3L3P0CL85 134 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 TNP2Q05952 138 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 SOHLH1Q5JUK2 328 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 RPL7L1Q6DKI1 246 aaKnown RBP12.45□□□□□ -0.42
SRSF1-208ENST00000584773 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 RAB24Q969Q5 203 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 ST6GAL2Q96JF0 529 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 Q9H8V8 135 aa12.45□□□□□ -0.42
SRSF1-208ENST00000584773 H3BNG1 76 aa12.44□□□□□ -0.42
SRSF1-208ENST00000584773 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
SRSF1-208ENST00000584773 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
SRSF1-208ENST00000584773 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
SRSF1-208ENST00000584773 LENEPQ9Y5L5 61 aa12.44□□□□□ -0.42
SRSF1-208ENST00000584773 G3V3Q6 166 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 SFTA3P0C7M3 94 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 GCHFRP30047 84 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 ZNF575Q86XF7 245 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 TMED6Q8WW62 240 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 RYR1P21817 5038 aa12.43□□□□□ -0.42
SRSF1-208ENST00000584773 GNRH2O43555 120 aa12.42□□□□□ -0.42
SRSF1-208ENST00000584773 FHL2Q14192 279 aa12.42□□□□□ -0.42
SRSF1-208ENST00000584773 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
SRSF1-208ENST00000584773 C8orf49Q96NF6 230 aa12.42□□□□□ -0.42
SRSF1-208ENST00000584773 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
SRSF1-208ENST00000584773 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
SRSF1-208ENST00000584773 PAX4O43316 350 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
SRSF1-208ENST00000584773 OR2T35Q8NGX2 323 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 TREM1Q9NP99 234 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 PCLOQ9Y6V0 5065 aa12.41□□□□□ -0.42
SRSF1-208ENST00000584773 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 CRYBA4P53673 196 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 ZNF726P1Q15940 193 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 KRTAP17-1Q9BYP8 105 aa12.4□□□□□ -0.42
SRSF1-208ENST00000584773 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 TCRAP04437 139 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 TYMSP04818 313 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 ZNF80P51504 273 aaPredicted RBP12.39□□□□□ -0.43
SRSF1-208ENST00000584773 SERF2P84101 59 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 RGS21Q2M5E4 152 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 IQCF2Q8IXL9 164 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 ICOSQ9Y6W8 199 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 LRP1BQ9NZR2 4599 aa12.39□□□□□ -0.43
SRSF1-208ENST00000584773 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 MBP02144 154 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 SUMO1P63165 101 aaKnown RBP12.38□□□□□ -0.43
SRSF1-208ENST00000584773 TDRG1Q3Y452 100 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 C5orf17Q8NAS9 161 aa12.38□□□□□ -0.43
SRSF1-208ENST00000584773 ASB13Q8WXK3 278 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms