RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 IQCF2Q8IXL9 164 aa19.19■□□□□ 0.66
SMARCD2-210ENST00000584400 LINC00612Q8N6U2 182 aa19.19■□□□□ 0.66
SMARCD2-210ENST00000584400 CYTL1Q9NRR1 136 aa19.19■□□□□ 0.66
SMARCD2-210ENST00000584400 A0A0D9SG52 128 aa19.18■□□□□ 0.66
SMARCD2-210ENST00000584400 IBA57Q5T440 356 aaKnown RBP19.18■□□□□ 0.66
SMARCD2-210ENST00000584400 POM121L12Q8N7R1 296 aa19.17■□□□□ 0.66
SMARCD2-210ENST00000584400 GSN-AS1Q9NRJ2 163 aa19.17■□□□□ 0.66
SMARCD2-210ENST00000584400 GAGE12BA1L429 117 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 GAGE7O76087 117 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 GAGE12FP0CL80 117 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 GAGE12GP0CL81 117 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 GAGE12IP0CL82 117 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 Q6AWC8 147 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 NDFIP1Q9BT67 221 aa19.16■□□□□ 0.66
SMARCD2-210ENST00000584400 KANTRA0A1W2PQU2 76 aa19.15■□□□□ 0.66
SMARCD2-210ENST00000584400 A0A1W2PRE2 83 aa19.15■□□□□ 0.66
SMARCD2-210ENST00000584400 SUMO1P63165 101 aaKnown RBP19.15■□□□□ 0.66
SMARCD2-210ENST00000584400 UBE2DNLQ8IWF7 75 aa19.15■□□□□ 0.66
SMARCD2-210ENST00000584400 C11orf72Q8NBR9 251 aa19.15■□□□□ 0.66
SMARCD2-210ENST00000584400 FBLL1A6NHQ2 334 aaKnown RBP19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 TCRAP04437 139 aa19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 TCL1AP56279 114 aa19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 GNG5P63218 68 aa19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 EIF5AP63241 154 aaKnown RBP19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 FAM159AQ6UWV7 190 aa19.14■□□□□ 0.65
SMARCD2-210ENST00000584400 ZNF726P1Q15940 193 aa19.13■□□□□ 0.65
SMARCD2-210ENST00000584400 SSX7Q7RTT5 188 aa19.13■□□□□ 0.65
SMARCD2-210ENST00000584400 OR11H4Q8NGC9 324 aa19.13■□□□□ 0.65
SMARCD2-210ENST00000584400 NKX6-2Q9C056 277 aaPredicted RBP19.13■□□□□ 0.65
SMARCD2-210ENST00000584400 TREM1Q9NP99 234 aa19.13■□□□□ 0.65
SMARCD2-210ENST00000584400 TRGV2A0A075B6R0 118 aa19.12■□□□□ 0.65
SMARCD2-210ENST00000584400 ZNF415Q09FC8 603 aa19.12■□□□□ 0.65
SMARCD2-210ENST00000584400 RNF212Q495C1 297 aa19.12■□□□□ 0.65
SMARCD2-210ENST00000584400 STOML3Q8TAV4 291 aa19.12■□□□□ 0.65
SMARCD2-210ENST00000584400 EPDR1Q9UM22 224 aa19.12■□□□□ 0.65
SMARCD2-210ENST00000584400 TRAV8-1A0A0A6YYK1 113 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 TRAV21A0A0B4J279 112 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 SEC11BP0C7V7 166 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 LGALS9BQ3B8N2 356 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 Q6ZTI0 123 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 C18orf15Q96N68 181 aa19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 ZNF471Q9BX82 626 aaPredicted RBP19.11■□□□□ 0.65
SMARCD2-210ENST00000584400 TRGV11A0A075B6L2 103 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 TRGV1A0A0A0MS02 117 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 GGTLC3B5MD39 225 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 BCL2L11O43521 198 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 OR5I1Q13606 314 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 MUC21Q5SSG8 566 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 CYB561D1Q8N8Q1 229 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 ATG101Q9BSB4 218 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 TP53TG3Q9ULZ0 132 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 KLF12Q9Y4X4 402 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 HYDINQ4G0P3 5121 aa19.1■□□□□ 0.65
SMARCD2-210ENST00000584400 MAP1LC3B2A6NCE7 125 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 UMAD1C9J7I0 102 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 SPINK4O60575 86 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 PFDN1O60925 122 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 Q6ZQT7 251 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 MAP1LC3BQ9GZQ8 125 aa19.09■□□□□ 0.65
SMARCD2-210ENST00000584400 PSG8Q9UQ74 426 aa19.08■□□□□ 0.64
SMARCD2-210ENST00000584400 NUDT3O95989 172 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 IFNA7P01567 189 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 PPT1P50897 306 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 FGF8P55075 233 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 FLI1Q01543 452 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 TDRG1Q3Y452 100 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 ZFP69Q49AA0 526 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 TMEM75Q8N9X5 138 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 NAGKQ9UJ70 344 aa19.07■□□□□ 0.64
SMARCD2-210ENST00000584400 FAM3BP58499 235 aaPredicted RBP19.06■□□□□ 0.64
SMARCD2-210ENST00000584400 SAPCD1Q5SSQ6 148 aa19.06■□□□□ 0.64
SMARCD2-210ENST00000584400 KCNS1Q96KK3 526 aa19.06■□□□□ 0.64
SMARCD2-210ENST00000584400 SGK494Q96LW2 274 aa19.06■□□□□ 0.64
SMARCD2-210ENST00000584400 TMPRSS5Q9H3S3 457 aa19.06■□□□□ 0.64
SMARCD2-210ENST00000584400 F6UZH7 168 aa19.05■□□□□ 0.64
SMARCD2-210ENST00000584400 UBE2G2P60604 165 aa19.05■□□□□ 0.64
SMARCD2-210ENST00000584400 TVP23CQ96ET8 276 aa19.05■□□□□ 0.64
SMARCD2-210ENST00000584400 SPXQ9BT56 116 aa19.05■□□□□ 0.64
SMARCD2-210ENST00000584400 TRAV26-1A0A087WT03 109 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 H3BNG1 76 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 TPT1P13693 172 aaKnown RBP19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 TMEM183BQ1AE95 376 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 DPPA3Q6W0C5 159 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 TMUB2Q71RG4 321 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 TMEM183AQ8IXX5 376 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 HIST1H2BAQ96A08 127 aa19.04■□□□□ 0.64
SMARCD2-210ENST00000584400 FAM74A7A6NL05 159 aa19.03■□□□□ 0.64
SMARCD2-210ENST00000584400 CCL18P55774 89 aa19.03■□□□□ 0.64
SMARCD2-210ENST00000584400 PRNTQ86SH4 94 aa19.03■□□□□ 0.64
SMARCD2-210ENST00000584400 TCTE3Q8IZS6 198 aa19.03■□□□□ 0.64
SMARCD2-210ENST00000584400 SDF2L1Q9HCN8 221 aa19.03■□□□□ 0.64
SMARCD2-210ENST00000584400 HOXA5P20719 270 aa19.02■□□□□ 0.64
SMARCD2-210ENST00000584400 SMUG1Q53HV7 270 aa19.02■□□□□ 0.64
SMARCD2-210ENST00000584400 Q6ZNX1 250 aa19.02■□□□□ 0.64
SMARCD2-210ENST00000584400 TCEAL7Q9BRU2 100 aa19.02■□□□□ 0.64
SMARCD2-210ENST00000584400 MDFICQ9P1T7 246 aa19.02■□□□□ 0.64
SMARCD2-210ENST00000584400 IGLV2-11P01706 119 aa19.01■□□□□ 0.63
SMARCD2-210ENST00000584400 MRPL16Q9NX20 251 aaKnown RBP19.01■□□□□ 0.63
SMARCD2-210ENST00000584400 ARL2-SNX15V9GYD0 113 aa19.01■□□□□ 0.63
SMARCD2-210ENST00000584400 PEX7O00628 323 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms