RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 DKK2Q9UBU2 259 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 TMEM189A5PLL7 270 aa11.71□□□□□ -0.53
RNF43-206ENST00000582293 PEX7O00628 323 aa11.71□□□□□ -0.53
RNF43-206ENST00000582293 HTN1P15515 57 aa11.71□□□□□ -0.53
RNF43-206ENST00000582293 TMEM75Q8N9X5 138 aa11.71□□□□□ -0.53
RNF43-206ENST00000582293 NKX6-2Q9C056 277 aaPredicted RBP11.71□□□□□ -0.53
RNF43-206ENST00000582293 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
RNF43-206ENST00000582293 TRAV34A0A0B4J273 112 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 F6UZH7 168 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 FAM222AQ5U5X8 452 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 Q6AWC8 147 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 Q6ZTC4 211 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 PYGO2Q9BRQ0 406 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 NIPSNAP3BQ9BS92 247 aa11.7□□□□□ -0.54
RNF43-206ENST00000582293 IFNA7P01567 189 aa11.69□□□□□ -0.54
RNF43-206ENST00000582293 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
RNF43-206ENST00000582293 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
RNF43-206ENST00000582293 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
RNF43-206ENST00000582293 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
RNF43-206ENST00000582293 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
RNF43-206ENST00000582293 PHLDA1Q8WV24 401 aaPredicted RBP11.69□□□□□ -0.54
RNF43-206ENST00000582293 TREM1Q9NP99 234 aa11.69□□□□□ -0.54
RNF43-206ENST00000582293 TP53TG3Q9ULZ0 132 aa11.69□□□□□ -0.54
RNF43-206ENST00000582293 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
RNF43-206ENST00000582293 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
RNF43-206ENST00000582293 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
RNF43-206ENST00000582293 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
RNF43-206ENST00000582293 K7EQM0 130 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 CEMP1Q6PRD7 247 aaPredicted RBP11.67□□□□□ -0.54
RNF43-206ENST00000582293 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 PRNTQ86SH4 94 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 Q86TA4 180 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 KLF12Q9Y4X4 402 aa11.67□□□□□ -0.54
RNF43-206ENST00000582293 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
RNF43-206ENST00000582293 SCO2A0A1W2PP80 73 aa11.66□□□□□ -0.54
RNF43-206ENST00000582293 EIF4E3Q8N5X7 224 aaKnown RBP11.66□□□□□ -0.54
RNF43-206ENST00000582293 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
RNF43-206ENST00000582293 TCEAL7Q9BRU2 100 aa11.66□□□□□ -0.54
RNF43-206ENST00000582293 TENM2Q9NT68 2774 aa11.66□□□□□ -0.54
RNF43-206ENST00000582293 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
RNF43-206ENST00000582293 C11orf94C9JXX5 98 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 PPT1P50897 306 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 MUC21Q5SSG8 566 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 LYPD6BQ8NI32 183 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 C11orf21Q9P2W6 132 aa11.65□□□□□ -0.54
RNF43-206ENST00000582293 TRBV6-1A0A0K0K1D8 114 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 NUPR2A6NF83 97 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 CBY3A6NI87 242 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 LYRM9A8MSI8 78 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 RGS13O14921 159 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 LINC00612Q8N6U2 182 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 NOP10Q9NPE3 64 aaKnown RBP11.64□□□□□ -0.55
RNF43-206ENST00000582293 GSN-AS1Q9NRJ2 163 aa11.64□□□□□ -0.55
RNF43-206ENST00000582293 TIMM8BQ9Y5J9 83 aaPredicted RBP11.64□□□□□ -0.55
RNF43-206ENST00000582293 LYSTQ99698 3801 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 GCGP01275 180 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 COX8CQ7Z4L0 72 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 C11orf52Q96A22 123 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 FMC1Q96HJ9 113 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 NDFIP1Q9BT67 221 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
RNF43-206ENST00000582293 TEX48A0A1B0GUV7 120 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 LTAP01374 205 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 CRIP1P50238 77 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
RNF43-206ENST00000582293 SMUG1Q53HV7 270 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 MDFICQ9P1T7 246 aa11.62□□□□□ -0.55
RNF43-206ENST00000582293 RYR3Q15413 4870 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 TEX46H3BTG2 121 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 GNRH2O43555 120 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
RNF43-206ENST00000582293 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 BCL2P10415 239 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 AKR1C3P42330 323 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 TCL1AP56279 114 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 DAD1P61803 113 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
RNF43-206ENST00000582293 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 ZC2HC1AQ96GY0 325 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
RNF43-206ENST00000582293 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
RNF43-206ENST00000582293 RYR2Q92736 4967 aa11.6□□□□□ -0.55
RNF43-206ENST00000582293 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
RNF43-206ENST00000582293 TYMSP04818 313 aa11.6□□□□□ -0.55
RNF43-206ENST00000582293 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
RNF43-206ENST00000582293 TEX261Q6UWH6 196 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms