RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SGK494Q96LW2 274 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 GSN-AS1Q9NRJ2 163 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 TMEM167BQ9NRX6 74 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 TCRAP04437 139 aa14.17□□□□□ -0.14
SS18-218ENST00000581021 ANXA2RQ3ZCQ2 193 aa14.17□□□□□ -0.14
SS18-218ENST00000581021 EIF4E3Q8N5X7 224 aaKnown RBP14.17□□□□□ -0.14
SS18-218ENST00000581021 C5orf17Q8NAS9 161 aa14.17□□□□□ -0.14
SS18-218ENST00000581021 NDUFAF3Q9BU61 184 aa14.17□□□□□ -0.14
SS18-218ENST00000581021 EPPK1P58107 5090 aaKnown RBP14.17□□□□□ -0.14
SS18-218ENST00000581021 A0A0D9SG52 128 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 CBY3A6NI87 242 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 IGLV2-11P01706 119 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 SUMO1P63165 101 aaKnown RBP14.16□□□□□ -0.14
SS18-218ENST00000581021 Q6ZTI0 123 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 TCTE3Q8IZS6 198 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 ZNF471Q9BX82 626 aaPredicted RBP14.16□□□□□ -0.14
SS18-218ENST00000581021 LENEPQ9Y5L5 61 aa14.16□□□□□ -0.14
SS18-218ENST00000581021 IGHV1OR15-1A0A075B7D0 117 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 MAP1LC3B2A6NCE7 125 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 F6UZH7 168 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 DAZ2Q13117 558 aaKnown RBP14.15□□□□□ -0.14
SS18-218ENST00000581021 MUC21Q5SSG8 566 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 Q6AWC8 147 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 TMUB2Q71RG4 321 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 FAM210BQ96KR6 192 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 MAP1LC3BQ9GZQ8 125 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 KLF12Q9Y4X4 402 aa14.15□□□□□ -0.14
SS18-218ENST00000581021 DNAH10Q8IVF4 4471 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 KANTRA0A1W2PQU2 76 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 GAGE12BA1L429 117 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 SNURFLB1AK76 121 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 RGS13O14921 159 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 GAGE7O76087 117 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 GAGE12FP0CL80 117 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 GAGE12GP0CL81 117 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 GAGE12IP0CL82 117 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 UBE2G2P60604 165 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 ZNF680Q8NEM1 530 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 EPDR1Q9UM22 224 aa14.14□□□□□ -0.15
SS18-218ENST00000581021 hCG_2014768A0A024R1R8 64 aa14.13□□□□□ -0.15
SS18-218ENST00000581021 ATP5G1P05496 136 aa14.13□□□□□ -0.15
SS18-218ENST00000581021 SEC11BP0C7V7 166 aa14.13□□□□□ -0.15
SS18-218ENST00000581021 ATP5G3P48201 142 aa14.13□□□□□ -0.15
SS18-218ENST00000581021 TCL1AP56279 114 aa14.13□□□□□ -0.15
SS18-218ENST00000581021 FAM74A7A6NL05 159 aa14.12□□□□□ -0.15
SS18-218ENST00000581021 F5H768 121 aa14.12□□□□□ -0.15
SS18-218ENST00000581021 HOXA5P20719 270 aa14.12□□□□□ -0.15
SS18-218ENST00000581021 LGALSLQ3ZCW2 172 aaPredicted RBP14.12□□□□□ -0.15
SS18-218ENST00000581021 LINC00479Q96M42 142 aa14.12□□□□□ -0.15
SS18-218ENST00000581021 C8orf49Q96NF6 230 aa14.12□□□□□ -0.15
SS18-218ENST00000581021 ZNF80P51504 273 aaPredicted RBP14.11□□□□□ -0.15
SS18-218ENST00000581021 IBA57Q5T440 356 aaKnown RBP14.11□□□□□ -0.15
SS18-218ENST00000581021 CYB561D1Q8N8Q1 229 aa14.11□□□□□ -0.15
SS18-218ENST00000581021 TREM1Q9NP99 234 aa14.11□□□□□ -0.15
SS18-218ENST00000581021 MDFICQ9P1T7 246 aa14.11□□□□□ -0.15
SS18-218ENST00000581021 SERTM2A0A1B0GWG4 89 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 SPINK4O60575 86 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 PFDN1O60925 122 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 FAM213BQ8TBF2 198 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 ATG101Q9BSB4 218 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 PSG8Q9UQ74 426 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 FRAS1Q86XX4 4008 aa14.1□□□□□ -0.15
SS18-218ENST00000581021 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 TMEM75Q8N9X5 138 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 STOML3Q8TAV4 291 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 C11orf21Q9P2W6 132 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 NAGKQ9UJ70 344 aa14.09□□□□□ -0.15
SS18-218ENST00000581021 UMAD1C9J7I0 102 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 C1QBP02746 253 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 FLI1Q01543 452 aaPredicted RBP14.08□□□□□ -0.16
SS18-218ENST00000581021 TMEM183BQ1AE95 376 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 TDRG1Q3Y452 100 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 PRNTQ86SH4 94 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 TMEM183AQ8IXX5 376 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 MBD3L1Q8WWY6 194 aa14.08□□□□□ -0.16
SS18-218ENST00000581021 MRPL16Q9NX20 251 aaKnown RBP14.08□□□□□ -0.16
SS18-218ENST00000581021 A0A1B0GV50 99 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 PEX7O00628 323 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 P0DMU3 169 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 FAM231AP0DMU4 169 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 FAM231CP0DMU5 169 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 TPT1P13693 172 aaKnown RBP14.07□□□□□ -0.16
SS18-218ENST00000581021 DNAH2Q9P225 4427 aa14.07□□□□□ -0.16
SS18-218ENST00000581021 TRAV21A0A0B4J279 112 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 A0A1B0GVG6 124 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 GNRH2O43555 120 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 IFNA7P01567 189 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 ZNF415Q09FC8 603 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 POM121L12Q8N7R1 296 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 SFT2D1Q8WV19 159 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 C18orf15Q96N68 181 aa14.06□□□□□ -0.16
SS18-218ENST00000581021 TRAV26-1A0A087WT03 109 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 K7EQM0 130 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 OR5I1Q13606 314 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 FAM159AQ6UWV7 190 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 Q86TA4 180 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 AKAP14Q86UN6 197 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 C15orf53Q8NAA6 179 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms