RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HLA-DRB4X5D2U9 266 aa5.92□□□□□ -1.46
COPS3-215ENST00000578317 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 IGKV2-40A0A087WW87 121 aaPredicted RBP5.91□□□□□ -1.46
COPS3-215ENST00000578317 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 C9JCJ5 164 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 G3V4G9 280 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 IGKV2D-40P01614 121 aaPredicted RBP5.91□□□□□ -1.46
COPS3-215ENST00000578317 AKR1C3P42330 323 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 ZNF138P52744 262 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 FLI1Q01543 452 aaPredicted RBP5.91□□□□□ -1.46
COPS3-215ENST00000578317 SAPCD1Q5SSQ6 148 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 TMEM78Q5T7P6 136 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 TMEM88Q6PEY1 159 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 SLC7A5P1Q8MH63 180 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 FAM19A4Q96LR4 140 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 VGLL1Q99990 258 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 MLST8Q9BVC4 326 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 PARLQ9H300 379 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 PSG8Q9UQ74 426 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 LY96Q9Y6Y9 160 aa5.91□□□□□ -1.46
COPS3-215ENST00000578317 SORL1Q92673 2214 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 F6UB75 175 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 LTAP01374 205 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 CT45A10P0DMU9 189 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 CRISP2P16562 243 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 KRTAP10-11P60412 298 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 UBE2G1P62253 170 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 C10orf91Q5T1B1 145 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 GDF5OSQ5U4N7 250 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 BAGE2Q86Y30 109 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 APRG1Q8IVJ8 170 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 DERL1Q9BUN8 251 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 SEC11CQ9BY50 192 aa5.9□□□□□ -1.46
COPS3-215ENST00000578317 TRBV20OR9-2A0A075B6H5 130 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 TRAV8-1A0A0A6YYK1 113 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 TRAV34A0A0B4J273 112 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 KNCNA6PVL3 124 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 ZNF727A8MUV8 499 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 A8MZ25 164 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 SFTA3P0C7M3 94 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 ZNF705DP0CH99 300 aaPredicted RBP5.89□□□□□ -1.47
COPS3-215ENST00000578317 ZNF705BP0CI00 300 aaPredicted RBP5.89□□□□□ -1.47
COPS3-215ENST00000578317 DEFB1P60022 68 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 HIST1H1AQ02539 215 aaPredicted RBP5.89□□□□□ -1.47
COPS3-215ENST00000578317 ERCC8Q13216 396 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 AMTNQ6UX39 209 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 TMEM183AQ8IXX5 376 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 IGF2BP2-AS1Q96M15 143 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 SMIM7Q9BQ49 75 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 CTDSP1Q9GZU7 261 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 RPH3ALQ9UNE2 315 aa5.89□□□□□ -1.47
COPS3-215ENST00000578317 GNG4P50150 75 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 TMEM241Q24JQ0 296 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 PRNTQ86SH4 94 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
COPS3-215ENST00000578317 STHQ8IWL8 128 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 TVP23CQ96ET8 276 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 KLLNB2CW77 178 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 F8W036 122 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 IGLV2-8P01709 118 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 AMBPP02760 352 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 TSPOP30536 169 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 CEBPGP53567 150 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 NUTF2P61970 127 aaKnown RBP5.88□□□□□ -1.47
COPS3-215ENST00000578317 PNRC1Q12796 327 aaPredicted RBP5.88□□□□□ -1.47
COPS3-215ENST00000578317 CENPWQ5EE01 88 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 LINC00322Q6ZN03 302 aaPredicted RBP5.88□□□□□ -1.47
COPS3-215ENST00000578317 Q86TA4 180 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 ZFAND2AQ8N6M9 145 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 OR4B1Q8NGF8 309 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 OCC1Q8TAD7 63 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 SGK494Q96LW2 274 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 NIPSNAP3BQ9BS92 247 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 NDFIP1Q9BT67 221 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 BIN3Q9NQY0 253 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 NAT8Q9UHE5 227 aa5.88□□□□□ -1.47
COPS3-215ENST00000578317 CARHSP1Q9Y2V2 147 aaKnown RBP5.88□□□□□ -1.47
COPS3-215ENST00000578317 KIR2DL5BA0A0G2JN68 375 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 KIR2DL5BA0A0G2JPC4 375 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 GCGP01275 180 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 NPSP0C0P6 89 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 ADCYAP1P18509 176 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 LEPP41159 167 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 CDKN1BP46527 198 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 ZNF674Q2M3X9 581 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 SMUG1Q53HV7 270 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 MORN3Q6PF18 240 aaPredicted RBP5.87□□□□□ -1.47
COPS3-215ENST00000578317 LINC01551Q86U37 167 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 KIR2DL5AQ8N109 375 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 KIR2DL5BQ8NHK3 375 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 IL17DQ8TAD2 202 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 Q8TAT8 98 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 SDF2L1Q9HCN8 221 aa5.87□□□□□ -1.47
COPS3-215ENST00000578317 RBMY1BA6NDE4 496 aaKnown RBP5.86□□□□□ -1.47
COPS3-215ENST00000578317 RBMY1EA6NEQ0 496 aaKnown RBP5.86□□□□□ -1.47
COPS3-215ENST00000578317 RBMY1DP0C7P1 496 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms