RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 GAGE12FP0CL80 117 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 GAGE12GP0CL81 117 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 GAGE12IP0CL82 117 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 PRR9Q5T870 116 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 KCNRGQ8N5I3 272 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 C5orf17Q8NAS9 161 aa8.22□□□□□ -1.09
GGA3-204ENST00000578208 A0A0D9SG52 128 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 HMSDA8MTL9 139 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 GNG5P63218 68 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 ZNF415Q09FC8 603 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.1
GGA3-204ENST00000578208 IBA57Q5T440 356 aaKnown RBP8.21□□□□□ -1.1
GGA3-204ENST00000578208 FAM159AQ6UWV7 190 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 GSN-AS1Q9NRJ2 163 aa8.21□□□□□ -1.1
GGA3-204ENST00000578208 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 TRGV1A0A0A0MS02 117 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 PFDN1O60925 122 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 TCL1AP56279 114 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 SUMO1P63165 101 aaKnown RBP8.2□□□□□ -1.1
GGA3-204ENST00000578208 EIF5AP63241 154 aaKnown RBP8.2□□□□□ -1.1
GGA3-204ENST00000578208 Q6AWC8 147 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 LINC00612Q8N6U2 182 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 ATG101Q9BSB4 218 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
GGA3-204ENST00000578208 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 NAGKQ9UJ70 344 aa8.2□□□□□ -1.1
GGA3-204ENST00000578208 TRGV11A0A075B6L2 103 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 A0A1W2PRE2 83 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 MAP1LC3B2A6NCE7 125 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
GGA3-204ENST00000578208 BCL2L11O43521 198 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 NUDT3O95989 172 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 TCRAP04437 139 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 OR5I1Q13606 314 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 ZFP69Q49AA0 526 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 MUC21Q5SSG8 566 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 Q6ZTI0 123 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 CYB561D1Q8N8Q1 229 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 MAP1LC3BQ9GZQ8 125 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
GGA3-204ENST00000578208 GGTLC3B5MD39 225 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 F6UZH7 168 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 IFNA7P01567 189 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 PPT1P50897 306 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 UBE2G2P60604 165 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 ZNF726P1Q15940 193 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 RNF212Q495C1 297 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 OR11H4Q8NGC9 324 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
GGA3-204ENST00000578208 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 EPDR1Q9UM22 224 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 HYDINQ4G0P3 5121 aa8.18□□□□□ -1.1
GGA3-204ENST00000578208 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 SEC11BP0C7V7 166 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 FGF8P55075 233 aaPredicted RBP8.17□□□□□ -1.1
GGA3-204ENST00000578208 FLI1Q01543 452 aaPredicted RBP8.17□□□□□ -1.1
GGA3-204ENST00000578208 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 LGALS9BQ3B8N2 356 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 Q6ZQT7 251 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 TMEM183AQ8IXX5 376 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 TMEM75Q8N9X5 138 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 SGK494Q96LW2 274 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 TMPRSS5Q9H3S3 457 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
GGA3-204ENST00000578208 TRAV26-1A0A087WT03 109 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 SPINK4O60575 86 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
GGA3-204ENST00000578208 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
GGA3-204ENST00000578208 SAPCD1Q5SSQ6 148 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 TMUB2Q71RG4 321 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 PRNTQ86SH4 94 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 FAM213BQ8TBF2 198 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 C18orf15Q96N68 181 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 SPXQ9BT56 116 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
GGA3-204ENST00000578208 MRPL16Q9NX20 251 aaKnown RBP8.16□□□□□ -1.1
GGA3-204ENST00000578208 A0A0J9YY99 117 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 GCGP01275 180 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 CCL18P55774 89 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 TDRG1Q3Y452 100 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 SMUG1Q53HV7 270 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 HIST1H2BAQ96A08 127 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 TVP23CQ96ET8 276 aa8.15□□□□□ -1.1
GGA3-204ENST00000578208 FAM74A7A6NL05 159 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 H3BNG1 76 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 PEX7O00628 323 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 HOXA5P20719 270 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 CST9LP1Q5W188 147 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 EIF5AL1Q6IS14 154 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms