RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ATRXP46100 2492 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 BUB3O43684 328 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 LINC01559Q495D7 138 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 SAMD5Q5TGI4 173 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 ZMAT4Q9H898 229 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 MUC6Q6W4X9 2439 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 FABP2P12104 132 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 NPFFR1Q9GZQ6 430 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 UFC1Q9Y3C8 167 aa13.46□□□□□ -0.25
SCARF1-205ENST00000571272 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.26
SCARF1-205ENST00000571272 SMIM17P0DL12 118 aa13.46□□□□□ -0.26
SCARF1-205ENST00000571272 SRSF2Q01130 221 aaKnown RBP13.46□□□□□ -0.26
SCARF1-205ENST00000571272 Q8N9W7 124 aa13.46□□□□□ -0.26
SCARF1-205ENST00000571272 TRBV25-1A0A075B6N4 114 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 G3V4G9 280 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 ZFP36P26651 326 aaKnown RBP13.45□□□□□ -0.26
SCARF1-205ENST00000571272 CLEC19AQ6UXS0 136 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 ZNF502Q8TBZ5 544 aa13.45□□□□□ -0.26
SCARF1-205ENST00000571272 COL6A6A6NMZ7 2263 aa13.44□□□□□ -0.26
SCARF1-205ENST00000571272 DPM2O94777 84 aa13.44□□□□□ -0.26
SCARF1-205ENST00000571272 Q8N8P6 123 aa13.44□□□□□ -0.26
SCARF1-205ENST00000571272 MRPL35Q9NZE8 188 aaKnown RBP13.44□□□□□ -0.26
SCARF1-205ENST00000571272 NEGR1Q7Z3B1 354 aa13.44□□□□□ -0.26
SCARF1-205ENST00000571272 NHP2Q9NX24 153 aaKnown RBP13.44□□□□□ -0.26
SCARF1-205ENST00000571272 AGRNO00468 2067 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 IGLV2-18A0A075B6J9 118 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 G3V318 75 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 TCF15Q12870 199 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 PIFOQ8TCI5 191 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 CCL21O00585 134 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 ATP6V0E1O15342 81 aa13.43□□□□□ -0.26
SCARF1-205ENST00000571272 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 ZFHX3Q15911 3703 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 GOSR1O95249 250 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 EBI3Q14213 229 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 HIGD1BQ9P298 99 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 EFNA4P52798 201 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
SCARF1-205ENST00000571272 ATP5LO75964 103 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
SCARF1-205ENST00000571272 MYOZ3Q8TDC0 251 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 TRAV8-2A0A0B4J237 113 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 J3KRW8 73 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 SPRY2O43597 315 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 SPANXN1Q5VSR9 72 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 NRACQ8N912 160 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 FAM110DQ8TAY7 271 aaPredicted RBP13.41□□□□□ -0.26
SCARF1-205ENST00000571272 CCDC140Q96MF4 163 aa13.41□□□□□ -0.26
SCARF1-205ENST00000571272 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
SCARF1-205ENST00000571272 LAGE3Q14657 143 aa13.4□□□□□ -0.26
SCARF1-205ENST00000571272 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
SCARF1-205ENST00000571272 RBAKDNA6NC62 111 aa13.4□□□□□ -0.26
SCARF1-205ENST00000571272 MINOS1Q5TGZ0 78 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 SMPXQ9UHP9 88 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 MINOS1-NBL1R4GNA1 71 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 IGF2RP11717 2491 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 OOSP1A8MZH6 123 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 C8orf86Q6ZUL3 223 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 CEND1Q8N111 149 aa13.39□□□□□ -0.27
SCARF1-205ENST00000571272 H3BVH4 76 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 RAB9AP51151 201 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 FOXC1Q12948 553 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 PHLDA1Q8WV24 401 aaPredicted RBP13.38□□□□□ -0.27
SCARF1-205ENST00000571272 KLK15Q9H2R5 256 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 PSMG4Q5JS54 123 aa13.38□□□□□ -0.27
SCARF1-205ENST00000571272 TEX48A0A1B0GUV7 120 aa13.37□□□□□ -0.27
SCARF1-205ENST00000571272 IGF1P05019 195 aa13.37□□□□□ -0.27
SCARF1-205ENST00000571272 C11orf71Q6IPW1 123 aa13.37□□□□□ -0.27
SCARF1-205ENST00000571272 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
SCARF1-205ENST00000571272 METTL26Q96S19 204 aa13.37□□□□□ -0.27
SCARF1-205ENST00000571272 K7ENP7 123 aa13.36□□□□□ -0.27
SCARF1-205ENST00000571272 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
SCARF1-205ENST00000571272 PRR9Q5T870 116 aa13.36□□□□□ -0.27
SCARF1-205ENST00000571272 SIRPDQ9H106 197 aa13.36□□□□□ -0.27
SCARF1-205ENST00000571272 LINC00527Q9UJ94 153 aa13.36□□□□□ -0.27
SCARF1-205ENST00000571272 A0A087WX48 190 aa13.35□□□□□ -0.27
SCARF1-205ENST00000571272 SRSF1Q07955 248 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCARF1-205ENST00000571272 SAA4P35542 130 aa13.35□□□□□ -0.27
SCARF1-205ENST00000571272 C16orf92Q96LL3 132 aa13.35□□□□□ -0.27
SCARF1-205ENST00000571272 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 ADORA2A-AS1P86434 159 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 M0R381 172 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 AJUBAQ96IF1 538 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 DEFB1P60022 68 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
SCARF1-205ENST00000571272 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-205ENST00000571272 C9orf47Q6ZRZ4 202 aa13.33□□□□□ -0.28
SCARF1-205ENST00000571272 IGLL5B9A064 214 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms