RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SSX7Q7RTT5 188 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 AKAP14Q86UN6 197 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 OR10G9Q8NGN4 311 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 OR10G7Q8NGN6 311 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
GTF3C1-211ENST00000569653 IGKV2-40A0A087WW87 121 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 KLLNB2CW77 178 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 EIF3GO75821 320 aaKnown RBP eCLIP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 IGKV2D-40P01614 121 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 CDC34P49427 236 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 SERF2P84101 59 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 BTN1A1Q13410 526 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 OR5I1Q13606 314 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 LGALSLQ3ZCW2 172 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 SOHLH1Q5JUK2 328 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 RXFP4Q8TDU9 374 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 GNPNAT1Q96EK6 184 aaPredicted RBP9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 Q9H3A6 140 aa9.58□□□□□ -0.88
GTF3C1-211ENST00000569653 TAAR5O14804 337 aa9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 ZNF324O75467 553 aaPredicted RBP9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 SLC25A5P05141 298 aaKnown RBP9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 CCL18P55774 89 aa9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 ESRGQ1W209 222 aa9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 FAM74A1Q5RGS3 127 aa9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
GTF3C1-211ENST00000569653 A0A0D9SG52 128 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 C7orf71A4D174 169 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 RBAKDNA6NC62 111 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 CCDC28AQ8IWP9 274 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 VGLL1Q99990 258 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 ARPC5LQ9BPX5 153 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 TP53TG3Q9ULZ0 132 aa9.56□□□□□ -0.88
GTF3C1-211ENST00000569653 HMGB3O15347 200 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 BCL2L11O43521 198 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 NMBP08949 121 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 STAG3L2P0CL84 134 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 STAG3L3P0CL85 134 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 ARL14EPLP0DKL9 152 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 CRISP2P16562 243 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 Q9H8V8 135 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 KLF12Q9Y4X4 402 aa9.55□□□□□ -0.88
GTF3C1-211ENST00000569653 A0A096LPF7 62 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 GPX1P07203 203 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 ZNF138P52744 262 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 RAB24Q969Q5 203 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 HYLS1Q96M11 299 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 LINC00467Q9BRT7 94 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 ACTR3CQ9C0K3 210 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
GTF3C1-211ENST00000569653 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 Q8TAT8 98 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 MRPS16Q9Y3D3 137 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-211ENST00000569653 PGPA6NDG6 321 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 H3BNG1 76 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 CXorf1O96002 111 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 GCHFRP30047 84 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 TCL1AP56279 114 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 ZNF726P1Q15940 193 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 ANXA2RQ3ZCQ2 193 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 AKR1C8PQ5T2L2 129 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 ZNF680Q8NEM1 530 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 TMED6Q8WW62 240 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 C18orf15Q96N68 181 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
GTF3C1-211ENST00000569653 TRGV1A0A0A0MS02 117 aa9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 KANTRA0A1W2PQU2 76 aa9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 SPINK4O60575 86 aa9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 IQCF2Q8IXL9 164 aa9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 EIF4E3Q8N5X7 224 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-211ENST00000569653 CTXND1A0A1B0GTU2 59 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 SERTM2A0A1B0GWG4 89 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 PFDN1O60925 122 aa9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-211ENST00000569653 ZFP69Q49AA0 526 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 316 ms