RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ZNF562Q6V9R5 426 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 PPP1R27Q86WC6 154 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 HRNRQ86YZ3 2850 aaPredicted RBP15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 ABCA2Q9BZC7 2435 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 TNFRSF6BO95407 300 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 ODF1Q14990 250 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 SIGLEC15Q6ZMC9 328 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 PGPEP1Q9NXJ5 209 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 WNK1Q9H4A3 2382 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 SORL1Q92673 2214 aa15.56■□□□□ 0.08
AC009041.2-204ENST00000568394 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 C16orf97H3BN30 126 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 C1orf162Q8NEQ5 155 aaPredicted RBP15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 VPS13CQ709C8 3753 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 IGKV1-17P01599 117 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 MC5RP33032 325 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 ERCC8Q13216 396 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 DPF1Q92782 380 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 ZNF502Q8TBZ5 544 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 SIGLEC9Q9Y336 463 aa15.55■□□□□ 0.08
AC009041.2-204ENST00000568394 CFAP46Q8IYW2 2715 aa15.54■□□□□ 0.08
AC009041.2-204ENST00000568394 CELSR2Q9HCU4 2923 aa15.54■□□□□ 0.08
AC009041.2-204ENST00000568394 WI2-2373I1.2A0A1W2PRP0 233 aa15.54■□□□□ 0.08
AC009041.2-204ENST00000568394 SCGB1C2P0DMR2 95 aa15.54■□□□□ 0.08
AC009041.2-204ENST00000568394 VKORC1Q9BQB6 163 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 H7C2G1 150 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 SS18L2Q9UHA2 77 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 ZNF80P51504 273 aaPredicted RBP15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 SHANK2-AS3Q9BTD1 123 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 RAXQ9Y2V3 346 aa15.53■□□□□ 0.08
AC009041.2-204ENST00000568394 OR11H12B2RN74 326 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 MT-ATP8P03928 68 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 EMP1P54849 157 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 C3orf36Q3SXR2 165 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 OR11H1Q8NG94 326 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 OR11H2Q8NH07 326 aa15.52■□□□□ 0.07
AC009041.2-204ENST00000568394 LY6DQ14210 128 aa15.51■□□□□ 0.07
AC009041.2-204ENST00000568394 MRAP2Q96G30 205 aa15.51■□□□□ 0.07
AC009041.2-204ENST00000568394 HHLA3Q9XRX5 114 aa15.51■□□□□ 0.07
AC009041.2-204ENST00000568394 E9PLD3 99 aa15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 HOXA3O43365 443 aaPredicted RBP15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 LINC01549A6NIU2 74 aa15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 CRYGCP07315 174 aa15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 ZFHX3Q15911 3703 aa15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 ZNF462Q96JM2 2506 aa15.5■□□□□ 0.07
AC009041.2-204ENST00000568394 ITPR1Q14643 2758 aa15.49■□□□□ 0.07
AC009041.2-204ENST00000568394 CCL21O00585 134 aa15.49■□□□□ 0.07
AC009041.2-204ENST00000568394 ADIPOQQ15848 244 aa15.49■□□□□ 0.07
AC009041.2-204ENST00000568394 ZNF491Q8N8L2 437 aa15.49■□□□□ 0.07
AC009041.2-204ENST00000568394 ONECUT1Q9UBC0 465 aa15.49■□□□□ 0.07
AC009041.2-204ENST00000568394 SCGB1A1P11684 91 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 HLA-DRB4P13762 266 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 CDSNQ15517 529 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 SPANXN1Q5VSR9 72 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 Q6ZS92 163 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 PRR25Q96S07 402 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 HLA-DRB4X5D2U9 266 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 RRN3P1Q2M238 152 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 RNF182Q8N6D2 247 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 ZNF493Q6ZR52 646 aa15.48■□□□□ 0.07
AC009041.2-204ENST00000568394 MBD3L4A6NDZ8 208 aaPredicted RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 MBD3L3A6NE82 208 aaPredicted RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 MBD3L5A6NJ08 208 aaPredicted RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 TRGV3P03979 118 aa15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 IGHV1-8P0DP01 117 aa15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 GATA3P23771 443 aa15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 MBD3L2Q8NHZ7 208 aaPredicted RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 NXT2Q9NPJ8 142 aaKnown RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 DTX2Q86UW9 622 aa15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 RAI1Q7Z5J4 1906 aaPredicted RBP15.47■□□□□ 0.07
AC009041.2-204ENST00000568394 ANAPC13Q9BS18 74 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 TMEM14CQ9P0S9 112 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 ATP5LO75964 103 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 C8orf86Q6ZUL3 223 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 PHLDA1Q8WV24 401 aaPredicted RBP15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 CTSZQ9UBR2 303 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 MTORP42345 2549 aa15.46■□□□□ 0.07
AC009041.2-204ENST00000568394 ZFP2Q6ZN57 461 aa15.46■□□□□ 0.06
AC009041.2-204ENST00000568394 RNF183Q96D59 192 aa15.46■□□□□ 0.06
AC009041.2-204ENST00000568394 H3BRN7 92 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 FAM57AQ8TBR7 257 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 IGHV1-3A0A0C4DH29 117 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 C17orf100A8MU93 164 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 PRTN3P24158 256 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 OVOL3O00110 214 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 FCN3O75636 299 aa15.45■□□□□ 0.06
AC009041.2-204ENST00000568394 I3L2K1 104 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 COL27A1Q8IZC6 1860 aaPredicted RBP15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 NAV2Q8IVL1 2488 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 IGHV3OR16-10A0A075B7F0 116 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 ZNF815PA8K554 130 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 TEX22C9J3V5 150 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 GATA4P43694 442 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 FOXI1Q12951 378 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 SCGB3A1Q96QR1 104 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 HIGD1BQ9P298 99 aa15.44■□□□□ 0.06
AC009041.2-204ENST00000568394 IGLV3-9A0A075B6K5 115 aa15.43■□□□□ 0.06
AC009041.2-204ENST00000568394 Q8NA96 180 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms