RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 ZNF575Q86XF7 245 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 FAT2Q9NYQ8 4349 aa12.97□□□□□ -0.33
LINC01238-205ENST00000567549 C17orf112F2Z3M2 114 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 TNP2Q05952 138 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 ANXA2RQ3ZCQ2 193 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 AKR1C8PQ5T2L2 129 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 EIF4E3Q8N5X7 224 aaKnown RBP12.96□□□□□ -0.33
LINC01238-205ENST00000567549 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 Q9H3A6 140 aa12.96□□□□□ -0.33
LINC01238-205ENST00000567549 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
LINC01238-205ENST00000567549 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 A0A0J9YY99 117 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 MBP02144 154 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 GPX1P07203 203 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 S100A1P23297 94 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 SLAQ13239 276 aa12.95□□□□□ -0.34
LINC01238-205ENST00000567549 PCNPQ8WW12 178 aaKnown RBP12.95□□□□□ -0.34
LINC01238-205ENST00000567549 DNAH2Q9P225 4427 aa12.94□□□□□ -0.34
LINC01238-205ENST00000567549 KLLNB2CW77 178 aa12.94□□□□□ -0.34
LINC01238-205ENST00000567549 KIR3DS1Q14943 382 aa12.94□□□□□ -0.34
LINC01238-205ENST00000567549 IBA57Q5T440 356 aaKnown RBP12.94□□□□□ -0.34
LINC01238-205ENST00000567549 NPCDR1Q9BY65 106 aa12.94□□□□□ -0.34
LINC01238-205ENST00000567549 DNAH17Q9UFH2 4485 aa12.94□□□□□ -0.34
LINC01238-205ENST00000567549 CSN1S1P47710 185 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 COMMD7Q86VX2 200 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 BLNKQ8WV28 456 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 MRPL32Q9BYC8 188 aaKnown RBP12.93□□□□□ -0.34
LINC01238-205ENST00000567549 TMPRSS5Q9H3S3 457 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 FUT9Q9Y231 359 aa12.93□□□□□ -0.34
LINC01238-205ENST00000567549 TRGV1A0A0A0MS02 117 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 TRBV7-9A0A0J9YWB2 115 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 TEX46H3BTG2 121 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 PRB4P10163 310 aaPredicted RBP12.92□□□□□ -0.34
LINC01238-205ENST00000567549 CRISP2P16562 243 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 HOXA5P20719 270 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 Q6ZTI0 123 aa12.92□□□□□ -0.34
LINC01238-205ENST00000567549 M0R3E3 92 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
LINC01238-205ENST00000567549 TCL1AP56279 114 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 RAB2AP61019 212 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 OR51M1Q9H341 326 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 GSN-AS1Q9NRJ2 163 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
LINC01238-205ENST00000567549 RAB19A4D1S5 217 aa12.9□□□□□ -0.34
LINC01238-205ENST00000567549 NBEAP1P0C6P0 100 aa12.9□□□□□ -0.34
LINC01238-205ENST00000567549 ICAM4Q14773 271 aa12.9□□□□□ -0.34
LINC01238-205ENST00000567549 ESRGQ1W209 222 aa12.9□□□□□ -0.34
LINC01238-205ENST00000567549 AGPAT4-IT1Q9H0P7 198 aa12.9□□□□□ -0.34
LINC01238-205ENST00000567549 EREGO14944 169 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
LINC01238-205ENST00000567549 NDUFB4O95168 129 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 H2AFB1P0C5Y9 115 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 PYYP10082 97 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 ERCC8Q13216 396 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
LINC01238-205ENST00000567549 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
LINC01238-205ENST00000567549 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 PAX4O43316 350 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 ZNF138P52744 262 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 UQCC3Q6UW78 93 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
LINC01238-205ENST00000567549 TRAV1-1A0A0B4J248 108 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 SIVA1O15304 175 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 OR7C2O60412 319 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 SPINK4O60575 86 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 TAS2R45P59539 299 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 SPATA12Q7Z6I5 190 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 VGLL1Q99990 258 aa12.87□□□□□ -0.35
LINC01238-205ENST00000567549 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
LINC01238-205ENST00000567549 TRAV9-2A0A087WT02 112 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 A0A096LPF7 62 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 K7EP13 123 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 FHITP49789 147 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
LINC01238-205ENST00000567549 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
LINC01238-205ENST00000567549 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms