RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SRD5A3Q9H8P0 318 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 KLLNB2CW77 178 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 G3V4G9 280 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 K7EN84 100 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 INSP01308 110 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 IGLV2-8P01709 118 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 P01737 135 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
CLK3-214ENST00000564096 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
CLK3-214ENST00000564096 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 CLRN3Q8NCR9 226 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
CLK3-214ENST00000564096 AURKAIP1Q9NWT8 199 aaPredicted RBP9.47□□□□□ -0.89
CLK3-214ENST00000564096 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 C7orf71A4D174 169 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 J3KRW8 73 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 AMTNQ6UX39 209 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
CLK3-214ENST00000564096 M0R2Z0 102 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 SH2D1AO60880 128 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 APOC4P55056 127 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 OR5I1Q13606 314 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
CLK3-214ENST00000564096 LOC102724200A0A096LPH7 203 aaPredicted RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 XKRY2A2RUG3 117 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 ZNF705GA8MUZ8 300 aaPredicted RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 H7BYZ3 331 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 BTN1A1Q13410 526 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 CT83Q5H943 113 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 Q6AWC8 147 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
CLK3-214ENST00000564096 RPS10P5Q9NQ39 176 aa9.44□□□□□ -0.9
CLK3-214ENST00000564096 A0A087WWC5 75 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 C7orf77A4D0Y5 90 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 CA1P00915 261 aaPredicted RBP9.43□□□□□ -0.9
CLK3-214ENST00000564096 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
CLK3-214ENST00000564096 RNF212Q495C1 297 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
CLK3-214ENST00000564096 PRR9Q5T870 116 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 Q8N1Y9 231 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
CLK3-214ENST00000564096 NAGKQ9UJ70 344 aa9.43□□□□□ -0.9
CLK3-214ENST00000564096 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 KIR2DL5BA0A0G2JN68 375 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 KIR2DL5BA0A0G2JPC4 375 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 FXYD7P58549 80 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 KIR2DL5AQ8N109 375 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 GOLT1BQ9Y3E0 138 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 VWFP04275 2813 aa9.42□□□□□ -0.9
CLK3-214ENST00000564096 TRAV12-3A0A0B4J271 114 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 ORM1P02763 201 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 ZNF80P51504 273 aaPredicted RBP9.41□□□□□ -0.9
CLK3-214ENST00000564096 KCNIP4Q6PIL6 250 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 FAM159AQ6UWV7 190 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
CLK3-214ENST00000564096 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 A8MWL6 223 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 A8MZ25 164 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 S100PP25815 95 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 CRIP1P50238 77 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
CLK3-214ENST00000564096 PYGO2Q9BRQ0 406 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 V9GYV3 84 aa9.4□□□□□ -0.9
CLK3-214ENST00000564096 NOTCH3Q9UM47 2321 aa9.39□□□□□ -0.91
CLK3-214ENST00000564096 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
CLK3-214ENST00000564096 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
CLK3-214ENST00000564096 UBE2CO00762 179 aa9.39□□□□□ -0.91
CLK3-214ENST00000564096 CRXO43186 299 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms