RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 OR51S1Q8NGJ8 323 aa4.92□□□□□ -1.62
HERPUD1-206ENST00000563343 SPXQ9BT56 116 aa4.92□□□□□ -1.62
HERPUD1-206ENST00000563343 COX11Q9Y6N1 276 aa4.92□□□□□ -1.62
HERPUD1-206ENST00000563343 IGHV3-16A0A0C4DH30 117 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 A0A0J9YXV3 536 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 DUXBA0A1W2PPF3 345 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 SMCO3A2RU48 225 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 NDUFB4O95168 129 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 RPP30P78346 268 aaKnown RBP4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 GUK1Q16774 197 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 ATRAIDQ6UW56 229 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 OR4C5Q8NGB2 326 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 YIPF6Q96EC8 236 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 SRRQ9GZT4 340 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 GTSF1LQ9H1H1 148 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 ZNF492Q9P255 531 aa4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 STRAPQ9Y3F4 350 aaKnown RBP4.91□□□□□ -1.62
HERPUD1-206ENST00000563343 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 A0A0D9SG52 128 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 DISC1C4P0D8 188 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 FNDC10F2Z333 226 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 AGPAT2O15120 278 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 LINC00694P0DN24 101 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 RRAS2P62070 204 aaPredicted RBP4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 SRPXP78539 464 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 NEDD8Q15843 81 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 MUC21Q5SSG8 566 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM210AQ96ND0 272 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 NPVFQ9HCQ7 196 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
HERPUD1-206ENST00000563343 IGKV2D-24A0A075B6R9 120 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 IGKV2-40A0A087WW87 121 aaPredicted RBP4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 TRAV8-1A0A0A6YYK1 113 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM25AB3EWG3 89 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM25CB3EWG5 89 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM25GB3EWG6 89 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 GGTLC3B5MD39 225 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 M0R2P5 195 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 IGKV2D-40P01614 121 aaPredicted RBP4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 AKAIN1P0CW23 69 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 UBE2MP61081 183 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 SSBP1Q04837 148 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 ZNF266Q14584 549 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM183BQ1AE95 376 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 CNPY1Q3B7I2 92 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 ZNF546Q86UE3 836 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM183AQ8IXX5 376 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 C9orf163Q8N9P6 203 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 MGST2Q99735 147 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 PRELID1Q9Y255 219 aa4.89□□□□□ -1.63
HERPUD1-206ENST00000563343 TRBV7-9A0A0J9YWB2 115 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 FABP12A6NFH5 140 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 COX7A2P2O60397 106 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 NCS1P62166 190 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 POLR2GP62487 172 aaKnown RBP eCLIP4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 ARL16Q0P5N6 197 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 RHOHQ15669 191 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 BAK1Q16611 211 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 C10orf113Q5VZT2 155 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 Q6AWC8 147 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 FAM122CQ6P4D5 195 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM14EPQ6UXP3 125 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 LINC00299Q6ZSB3 139 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 EXOC3-AS1Q8N2X6 119 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 Q8TAT8 98 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 RAB2BQ8WUD1 216 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 RMI2Q96E14 147 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 PRRT1Q99946 306 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 RABL2BQ9UNT1 228 aa4.88□□□□□ -1.63
HERPUD1-206ENST00000563343 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 A0A087WXM4 84 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 FBLL1A6NHQ2 334 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 GOSR2O14653 212 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 GNRH2O43555 120 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 NOL3O60936 208 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 METTL15P1P0C7V9 234 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 ANXA3P12429 323 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 ZNF138P52744 262 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 VWC2Q2TAL6 325 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 C14orf177Q52M58 125 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 TMEM78Q5T7P6 136 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 CFAP126Q5VTH2 177 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 DPPA3Q6W0C5 159 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 NIT1Q86X76 327 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 CLVS1Q8IUQ0 354 aaPredicted RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 SMIM4Q8WVI0 70 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 BCL7BQ9BQE9 202 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 RBM38Q9H0Z9 239 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 MIXL1Q9H2W2 232 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 DPH3P1Q9H4G8 78 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 PSENENQ9NZ42 101 aa4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 RSL24D1Q9UHA3 163 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-206ENST00000563343 PIGBOS1A0A0B4J2F0 54 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms